Pairwise Alignments

Query, 259 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 365 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  115 bits (288), Expect = 1e-30
 Identities = 64/205 (31%), Positives = 121/205 (59%), Gaps = 6/205 (2%)

Query: 26  GGIVATLILSVLGIVLAFPLSVLLALARLSPWRLLRWPATVLVYVVRGVPLLMVILWVYF 85
           GG++ TL+L+ +GIV A PL ++LAL R S   ++R   T  + + RGVPL+ V+     
Sbjct: 156 GGLMLTLVLAYVGIVAALPLGMVLALGRRSSMPVVRISCTTFIELWRGVPLISVLFMASV 215

Query: 86  LVPILIGREVSGFTTMLCTLV---IYEGAYLSEVVRAGILSLPKGQSEAARALGHSHLGT 142
           ++P+ +   V+ F  +L  L+   +++ AY++EV+R G+ ++P+GQ EAA ALG     +
Sbjct: 216 MLPLFLPTGVT-FDKLLRALIGITLFQSAYMAEVIRGGLQAIPRGQFEAASALGLGFWRS 274

Query: 143 MWFVILPQALYNMLPSMLSQFISTIKETTLGYVINVQEL--TFAANQINNQLLTKPFQVF 200
              +ILPQAL  ++P +++ FI+  K+TTL  +I + ++  T  +  ++        + +
Sbjct: 275 TGLIILPQALKLVIPGVVNTFIALFKDTTLVLIIGLLDILGTVQSAIVDPAWSRVAVEGY 334

Query: 201 FILALTYYVVCFSLTQLAQWLERRI 225
                 +++ CF +++ +Q LE ++
Sbjct: 335 IFAGFCFWIFCFGMSRYSQALESKL 359