Pairwise Alignments

Query, 227 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 5e-18
 Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 11  LVVEADPAVARRMLRILGALAPGRHAPCVSTPEEAHHLLAAFSFDLVFVDMQLQPTGEGA 70
           L+V+  P + R + ++L             +  EA  L      DL+ +D+ ++    G 
Sbjct: 6   LLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMS-GL 64

Query: 71  RLITRIRVAQPRSQVVAISHMDNRDLVRSAFAAGATGYLLSDAEDAEIAYALRALESGGV 130
             +T +R  +  + VV ++  D+   + +   AGA GYLL D E  ++   L+    G  
Sbjct: 65  DTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGEK 124

Query: 131 ALDPRVGRRVLDMLAVSMRRGTVTAPLDAAEAPRQLRPRELQFLRLIADGLSNRQIADAL 190
           A    V R +L+       R   + P +A      L  RE+Q +  +A G  NRQIAD L
Sbjct: 125 AFSESVERYLLN-------REHTSNPFEA------LTEREMQIMSEVAKGYRNRQIADRL 171

Query: 191 EVSIHTVEFHARNAYRKLEVKSRTQAIL 218
            +S  TV+ H ++  +KL+V SRT A +
Sbjct: 172 FISESTVKVHMKSLLKKLDVPSRTAATI 199