Pairwise Alignments

Query, 227 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 75.9 bits (185), Expect = 6e-19
 Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 12/183 (6%)

Query: 44  EAHHLLAAFSFDLVFVDMQLQPTGEGARLITRIRVAQPRSQVVAISHMDNRDLVRSAFAA 103
           EA  L+     D+V +D+ + P   G      I+   P ++V+ ++  DNR+ +     A
Sbjct: 45  EALELVKLHQPDVVLMDVSM-PIMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQA 103

Query: 104 GATGYLLSDAEDAEIAYALRALESGGVALDPRVGRRVLDMLAVSMRRGTVTAPLDAAEAP 163
           GA GY+L +    ++  A++ +  G           +                L  A  P
Sbjct: 104 GAMGYMLKEISALKMVQAIKTVHQGATYFCESTTSTLFSQEI-----------LPVANKP 152

Query: 164 RQLRPRELQFLRLIADGLSNRQIADALEVSIHTVEFHARNAYRKLEVKSRTQAILEATRH 223
             L  RE   LR++A G S+++IA  L +S  TVE H +N   KL++ S  +    A +H
Sbjct: 153 NPLSRREEAILRMVAQGCSSKKIATLLNISYRTVETHRQNIKHKLDIHSTAELAQYALQH 212

Query: 224 GLL 226
           GLL
Sbjct: 213 GLL 215