Pairwise Alignments

Query, 350 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 12/203 (5%)

Query: 131 PFFFFDDSGQWTGLEVGLAQSLAKELGVKLRFNRDASTFNAVVDLLASGQADLAISKLSR 190
           PF + D++ Q  G +V LA +L K+L  K  F+  A  F++++  L   + D AIS +  
Sbjct: 33  PFEYMDENNQIQGFDVDLANALCKQLEAKCSFHNQA--FDSLIPALKFKRYDAAISAMDI 90

Query: 191 TLARTQTIAFSDAYLTLNHSLILNRVKFAQISHGRPLPEVIRNFNGSIGVIAKSSFADYA 250
           T AR + + FS+ Y         N   F  ++ G+   +        +GV   S+   + 
Sbjct: 91  TEARLEQVNFSNPYYD-------NSAAFVSLA-GKVADQAALK-GKRVGVQNGSTHQSFL 141

Query: 251 RTNFPHAKIQEFATWNEVLAALHKGEIVSAYRDEFEVKRVLKADPTVSLVLRTVT-LKDL 309
                      ++++ +    +  G I S + D   V    K D  ++ V   VT  +  
Sbjct: 142 LEQLSDVVAVPYSSYQDAFIDMKNGRIDSVFGDTAVVAEWFKGDNNLAYVGERVTNAQYF 201

Query: 310 EDTLGIGVAVTDPTLLAYVNQFL 332
            +  GI V   +  LL  +N  L
Sbjct: 202 GNGFGIAVNKDNQALLDQLNAAL 224