Pairwise Alignments

Query, 350 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 50.4 bits (119), Expect = 5e-11
 Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 24/234 (10%)

Query: 106 LLAPDIARIV----MRGELVVAMLKVDTPPFFFFDDSGQWTGLEVGLAQSLAKELGVKLR 161
           L+AP  A+ V      G + V ML VD PPF   D + Q  G +  +A+ LAKELGV++ 
Sbjct: 26  LVAPAAAQTVETIKSAGTVKVGML-VDFPPFGIMDANNQPDGYDADVAKLLAKELGVEVT 84

Query: 162 FNRDASTFNAVVDLLASGQADLAISKLSRTLARTQTIAFSDAYLTLNHSLILNRVKFAQI 221
                 T    +  L S Q DL ++ L  T  R + + FS  Y  ++    +     A +
Sbjct: 85  I--VPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYAGIS----IGVFGAADL 138

Query: 222 SHGRPLPEVIRNFNGSIGVIAKSSFADYARTNF--PHAKIQEFATWNEVLAALHKGEIVS 279
           +  +P      +  G    +A++S  D A T      A IQ F      + AL  G++  
Sbjct: 139 AVTKP-----EDLAGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAVQALLSGQV-- 191

Query: 280 AYRDEFEVKRVLKADPTVSLVLR-TVTLKDLEDTLGIGVAVTDPTLLAYVNQFL 332
              +   V  V+ A    +   R    L+  +   GI V      +L +VN FL
Sbjct: 192 ---ELIGVSNVVAAQIEAAAPGRFNQKLQLSQQVQGIAVRKGSSEMLKFVNGFL 242