Pairwise Alignments

Query, 646 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  253 bits (647), Expect = 2e-71
 Identities = 183/648 (28%), Positives = 308/648 (47%), Gaps = 51/648 (7%)

Query: 18  LGPEDLLLDTFQATEGLSRL---------FACSLTMRSPLDTIKGADLIGTSATVTLQRP 68
           L  E L++  F+  E LS           F   + + S L  +     +  +A +T+ R 
Sbjct: 13  LEDESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRD 72

Query: 69  EKNARLFNGIVSRFTYLGSNQDFATYTLELVPRMWLLTLGRDRVIYQNLSTPDIVQKVLG 128
            +  +  NGIV + +   +      Y+L LVP +  L+L  +  I+Q  S P+I+  +L 
Sbjct: 73  GQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQ 132

Query: 129 DFAV-DCRTALEGTYAPREYCVRYDETAFDFVSRLMEEEGIFYFFTFTADSHTLVLADSK 187
           +  + D   AL+   A RE+CV+Y ET   F+ R+  EEG+ Y     A  HTL+  DS 
Sbjct: 133 EMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSS 192

Query: 188 SAYESCPNAQELLVRSGEGGVGHTHSVTRFESDARLVTKDHEVDDYDFLTPDTSLLAKNS 247
            +      A+ +   +  GG  +   V   +          E+ DY F  P      +  
Sbjct: 193 DSQPKL--AKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQ 250

Query: 248 AK--AGRGSDYEF---PSRVAASA-ASARARIRQEEHQVGSQSGRGDSHCHYLTPGTTFK 301
            K  A +  +YE    P R    A   A ++IR E  +  +      S    L  G  F 
Sbjct: 251 GKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFD 310

Query: 302 LKEHPRADLNDEYVVHSVHHHAENEN------------YSNSFETLPLNTPFRPPRLTPR 349
           L++H    +N +++V   +H                  YSN  + +P +  +R  R   +
Sbjct: 311 LQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWRA-RPCAK 369

Query: 350 PVVAGSHTARVVGPSGHEVWTDQHGRIKVQFPWDRLGKKDDKSSCWMRVSQIWAGEGWGA 409
           P V G   A VVGP G E++ D  GR+KV FPWDR    ++KSSCW+RV+Q WAG  +G+
Sbjct: 370 PQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGS 429

Query: 410 LFLPRIGQEVVVSYVDGDPDRPLVSGSVYNGTHVTPVELPSASSQSTIRSRSLPGGSAGN 469
           + +PR+G EV+VS+++GDPD+P+++G  Y+ T+  P  LP   +++ +R+ +   G   N
Sbjct: 430 MAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTET-HQGQGYN 488

Query: 470 ELRFEDKKDAEELYMHAQKDMRTEIENDLTTKVIAGNELHTVTKGNRTVKVDTGNETHSV 529
           EL FED+  +E++ +HAQKD    IE+D T   +  ++ H     +R  ++   N+  +V
Sbjct: 489 ELSFEDQAGSEQILLHAQKDWDALIEHDHTE--VIRHDQHLTVDNDRFTRIQR-NQHLTV 545

Query: 530 KGTRALEVTGNETHDNKANFTQTVSGNYELKVTGNLVIDVTGTLLIKSAQTLDLKAGTDL 589
           +G    ++  + +H+        V  + + KV   + ++    + +KS   + ++AG +L
Sbjct: 546 EGEVRSKIALDSSHE--------VGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAEL 597

Query: 590 GANAGINF-KAEAGVALSAKGGASLTNEAPSISSKASAMNAVEGGGMV 636
              AG +F K +A       GG  L   A ++++  SA +    GG +
Sbjct: 598 TLKAGGSFVKVDA-------GGVHLVGPAINLNAGGSAGSGSAYGGQL 638