Pairwise Alignments

Query, 646 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  272 bits (696), Expect = 3e-77
 Identities = 195/657 (29%), Positives = 314/657 (47%), Gaps = 52/657 (7%)

Query: 18  LGPEDLLLDTFQATEGLSRL---------FACSLTMRSPLDTIKGADLIGTSATVTLQRP 68
           L  E L++  F   E LS           F   + + S +  +    ++   A + L R 
Sbjct: 13  LEDETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAELKLYRN 72

Query: 69  EKNARLFNGIVSRFTYLGSNQDFATYTLELVPRMWLLTLGRDRVIYQNLSTPDIVQKVLG 128
            +  +  +GIV  F+          Y L LVP +  L+L  +  I+Q  + P+I+  +L 
Sbjct: 73  SQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQ 132

Query: 129 DFAV-DCRTALEGTYAPREYCVRYDETAFDFVSRLMEEEGIFYFFTFTADSHTLVLADSK 187
           +  + D   AL+     RE+CV+Y E+  DF+ RL  EEG+ Y F   A  HTL  +D+ 
Sbjct: 133 EMGIHDYAFALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDAS 192

Query: 188 SAYESCPNAQELLVRSGEGGVGHTHSVTRFESDARLVTKDHEVDDYDFLTPDTSLL---- 243
            +    P  + +   +  GG   T  +       +    + ++ DY F  P  S L    
Sbjct: 193 DSLSKLP--EPIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ 250

Query: 244 -AKNSAKAGRGSDYEFPSRVAASA-ASARARIRQEEHQVGSQSGRGDSHCHYLTPGTTFK 301
             +   +  R   ++ P R       +A ++IR +  +  + +  G S+   L  G  F 
Sbjct: 251 GTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFD 310

Query: 302 LKEHPRADLNDEYVVHSVHHHAENEN------------YSNSFETLPLNTPFRPPRLTPR 349
           L+EH    +N ++VV S++H  E               Y+N F  +P +  +R     P+
Sbjct: 311 LQEHLDPAMNRDWVVVSINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWRAEP-QPK 369

Query: 350 PVVAGSHTARVVGPSGHEVWTDQHGRIKVQFPWDRLGKKDDKSSCWMRVSQIWAGEGWGA 409
           P V G   A VVGP G E++ D+HGR+K+ FPWDR    +++SSCW+RVSQ WAG  +G 
Sbjct: 370 PQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGF 429

Query: 410 LFLPRIGQEVVVSYVDGDPDRPLVSGSVYNGTHVTPVELPSASSQSTIRSRSLPGGSAGN 469
           + +PRIG EV+VS+++GDPD+P+++G  Y+ T+  P  LP   +++ +R+ +   G   N
Sbjct: 430 IAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTET-HQGEGFN 488

Query: 470 ELRFEDKKDAEELYMHAQKDMRTEIENDLTTKVIAGNELHTVTKGNRTVKVDTGNETHSV 529
           EL FED+   E++Y+HAQKD    IEND TT VI  ++  TV     T           +
Sbjct: 489 ELSFEDQAGKEQIYLHAQKDFDGLIENDHTT-VIRHDQHLTVENDQFT----------QI 537

Query: 530 KGTRALEVTGNETHDNKANFTQTVSGNYELKVTGNLVIDVTGTLLIKSAQTLDLKAGTDL 589
           K  + L V G      K + +  + G+ + K+    + D    + +K+   L L+AG +L
Sbjct: 538 KHNQHLTVEGESRTLVKLDCSSEIGGSLQQKIGSKAIYDAGTEVHLKAGNKLVLEAGNEL 597

Query: 590 GANAGINF-KAEAGVALSAKGGASLTNEAPSISSKASA-MNAVEGGGMVTLKGGLVK 644
              AG +F K +A       GG  +   A +++S  SA   +  GG M  L  G+ K
Sbjct: 598 TIKAGGSFIKVDA-------GGVHVVGSAINLNSGGSAGSGSGYGGKMAELPQGVDK 647