Pairwise Alignments

Query, 913 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

Subject, 861 a.a., ClpB protein from Pseudomonas fluorescens FW300-N2E2

 Score =  668 bits (1723), Expect = 0.0
 Identities = 395/908 (43%), Positives = 539/908 (59%), Gaps = 50/908 (5%)

Query: 1   MDIDIRTLLGRLNPECKRAMEQAAELCVQQTHYNVDLEHLLLKLVDNDAPDLRLVFGRFS 60
           +++D++ L+  L+ E +  +E++AE CV +    V +E L+L L++     L        
Sbjct: 2   INVDLQQLIQALDAETRSDLERSAERCVARGADKVLVEDLMLGLLERPQGLLARALQDAQ 61

Query: 61  IRPDTVQSQLQKSLDTFKRGNGRTPSLAPDFAPLFQEAWLMSSMLLGQQHIRSGTLMLAL 120
           +  D + + LQ  ++       R P  AP+     Q+A L++++ LG   +    L+LAL
Sbjct: 62  VSADELSAALQPRME---HSASRNPVFAPELVQWLQDALLVANLELGCSQVGQAALILAL 118

Query: 121 LDVDRLRGRLVDAAPALLQIPRGTLRDELAGLLQSSPEDAAASALAAAPVAPAPAASQHN 180
           L                    R  LR         S   A  + L+A  +     + Q  
Sbjct: 119 L--------------------RNPLR------YAGSAYQALLTRLSADRLRDFALSQQ-- 150

Query: 181 PPNTPSLPDAGAPPLQMPTARRGSSATPSLDQYTVDMTQLARDGAIDPIRGRDGEIRQII 240
              T S+ D  A P        G S    L ++T D+T+ AR+G +DP+  R GEIRQ+I
Sbjct: 151 ---TQSVVDHSAKP--------GDSL---LARFTHDLTRQAREGQLDPVLCRGGEIRQMI 196

Query: 241 DVLLRRRQNNPILTGEAGVGKTAVVEGFAQRVVQGDVPPALRQVSVRSLDLALLQAGAGV 300
           D+L+RRR+NNPI+ GEAGVGKTA+VEG A R+  G+VP AL  V + SLD+ LLQAGA +
Sbjct: 197 DILVRRRKNNPIVVGEAGVGKTAIVEGLALRIAAGEVPSALEGVELLSLDMGLLQAGASI 256

Query: 301 KGEFENRLKSVIAEVKASPTPVILFIDEAHQLIGAGGAEGQGDAANLLKPALARGELRTI 360
           KGEFE RLK VI EVKASP  +ILFIDEAH LIGAGG  G  DAANLLKPALARGELRTI
Sbjct: 257 KGEFERRLKGVIDEVKASPKSIILFIDEAHTLIGAGGNTGGADAANLLKPALARGELRTI 316

Query: 361 AATTWAEYKKYVERDPALARRFQVVKVEEPSEEVAIDMLRGMVETLEKHHGVEIIDDAVR 420
           AATTWAEYKKY E+DPALARRFQ V++ EP+   A+ +LRG+    E  HG+ + DDAV 
Sbjct: 317 AATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLARVYENSHGIYLRDDAVV 376

Query: 421 EAVKLSHRYITGRQLPDKAISVLDTACARVAIGQNGLPAELESAARDIATGESELRVLRH 480
            A +LS RY+TGRQLPDKA+ VLDTACARV I     P  LE    + A GE + + LR 
Sbjct: 377 AAAQLSARYLTGRQLPDKAVDVLDTACARVRISLAAAPQSLERLRGEWAEGERQRQALRR 436

Query: 481 EAATG-GEHQDAIATLTAKLDALRQKHKRLSDKLDEEKHAVMEIVALRRKIADSLRDDAP 539
           +A  G      A+  L  +L+A+  + + L  +  E++     +++LR+++A +      
Sbjct: 437 DAQAGLSIDLQALEALEVRLEAIEDERRTLEIQWTEQRILAERLLSLRQQLAKAREASV- 495

Query: 540 PPDEENDPALLTAALRRLEKGLEALQSDEPMVPVCVDGVMVAEVISGWTGIPVGKMMTDE 599
             D       L AAL      L A Q  E +V   V   +VAEVIS WTG+P+ ++  + 
Sbjct: 496 --DHPLSVEALEAALHETYGTLVAAQVHERLVSFEVCPRLVAEVISAWTGVPLAQLAREH 553

Query: 600 LHTVLNLKEKLAERVVGQDDALDAIARRVRTFRADLDDPGKPVGVFMLVGPSGVGKTETA 659
              V +   +L  R+ GQ+ A+ A+ R +R   A L  P  PVGVF+LVGPSGVGKTETA
Sbjct: 554 NLKVASFATELRARIRGQEPAVRALDRAMRAAAAGLSKPDAPVGVFLLVGPSGVGKTETA 613

Query: 660 FALADLLYGGERNVITVNMSEFQEAHTVSSLKGAPPGYVGYGRGGVLTEAVRRRPYSVVL 719
             LADLLYGG+R + T+NM+EFQE HTVS L GAPPGYVG+G GG+LTEAVR++PYSVVL
Sbjct: 614 HGLADLLYGGDRFITTLNMAEFQEKHTVSRLIGAPPGYVGFGEGGMLTEAVRQKPYSVVL 673

Query: 720 LDEMEKAHPDVLELFFQVFDKGTMEDGEGVQIDFKNTLILLTSNAAQDVITQASQGGRRP 779
           LDE+EKA PDVL LF+Q+FDKG   DGEG +IDF+NTLIL+TSN   + I +  + G +P
Sbjct: 674 LDEVEKADPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGSERINELCENGAKP 733

Query: 780 DPEELVERLRPELLKQFSPAFLGRLALVPYHHLGDEQIRSIVNLKLGKLARRFALNHHAI 839
             E L E +RP L + F PA L R+ +VPY+ +    +R +V +KL +L  R        
Sbjct: 734 SAECLEESIRPILSQHFKPALLARMCVVPYYPVSGPVLRELVEVKLDRLGERLH-RRQLG 792

Query: 840 FTWDEQVEDAITARCTEVDSGARNIDHILAHAVLPELSRQVLERISMAAAFTEVHMGMDG 899
           F++   + + +  RC+  D GAR ID +L   ++P +  ++L  ++       VH  ++G
Sbjct: 793 FSYCGHLVNHLVERCSRNDRGARLIDQLLDLHLMPLIVDRLLAAMAGGERLRHVHAVLNG 852

Query: 900 GGAFAFRF 907
               A  F
Sbjct: 853 DACVACEF 860