Pairwise Alignments

Query, 913 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

Subject, 854 a.a., ATP-dependent chaperone ClpB from Pseudomonas stutzeri RCH2

 Score =  519 bits (1336), Expect = e-151
 Identities = 331/884 (37%), Positives = 484/884 (54%), Gaps = 65/884 (7%)

Query: 9   LGRLNPECKRAMEQAAELCVQQTHYNVDLEHLLLKLVDNDAPDLRLVFGRFSIRPDTVQS 68
           + RL  + + A+  A  + V   H  ++  HL+  L++     ++ +  +       ++ 
Sbjct: 3   IDRLTSKLQLALSDAQSIAVGLDHPAIEPLHLMQALLEQQGGSIKPLLMQVGFDIAALRQ 62

Query: 69  QLQKSLDTFKRGNGRTP--SLAPDFAPLFQEAWLMSSMLLGQQHIRSGTLMLALLDVDRL 126
            L K LD   +    T   +L+ D A L  +A  ++    G Q+I S  ++LA LD +  
Sbjct: 63  ALTKELDQLPKLQNPTGDMNLSQDLARLLNQADRLAQQK-GDQYISSELVLLAALDSNTR 121

Query: 127 RGRLVDAAPALLQIPRGTLRDELAGLLQSSPEDAAASALAAAPVAPAPAASQHNPPNTPS 186
            G+L+ A                 G+ + + E+A  +      V         N PN   
Sbjct: 122 LGKLLLAQ----------------GVSKKALENAINNLRGGDAV---------NDPNA-- 154

Query: 187 LPDAGAPPLQMPTARRGSSATPSLDQYTVDMTQLARDGAIDPIRGRDGEIRQIIDVLLRR 246
                              +  +LD+YTVDMT+ A DG +DP+ GRD EIR+ I VL RR
Sbjct: 155 -----------------EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRR 197

Query: 247 RQNNPILTGEAGVGKTAVVEGFAQRVVQGDVPPALRQVSVRSLDLALLQAGAGVKGEFEN 306
            +NNP+L GE GVGKTA+VEG AQR+V G+VP  L+   + +LD+  L AGA  +GEFE 
Sbjct: 198 TKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEE 257

Query: 307 RLKSVIAEVKASPTPVILFIDEAHQLIGAGGAEGQGDAANLLKPALARGELRTIAATTWA 366
           RLK+V+ ++      VILFIDE H ++GAG AEG  DA N+LKPALARGEL  + ATT  
Sbjct: 258 RLKAVLNDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLD 317

Query: 367 EYKKYVERDPALARRFQVVKVEEPSEEVAIDMLRGMVETLEKHHGVEIIDDAVREAVKLS 426
           EY++Y+E+D AL RRFQ V V+EPSEE  I +LRG+ E  E HHGV I D A+  A KLS
Sbjct: 318 EYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLS 377

Query: 427 HRYITGRQLPDKAISVLDTACARVAIGQNGLPAELESAARDIATGESELRVLRHEAATGG 486
           HRYIT RQLPDKAI ++D A +R+ +  +  P EL+   R +   + E   L+ E     
Sbjct: 378 HRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEAT 437

Query: 487 EHQDAIATLTAKLDALRQKHKRLSDKLDEEKHAVMEIVALRRKIADSLRDDAPPPDEEND 546
           + +  +A L   +  L +++  L +    EK  V     +++KI +  + +      + D
Sbjct: 438 KKR--LAKLEDDIAKLAREYADLEEIWKSEKAEVQGSAQIQQKI-EQAKAELEAARRKGD 494

Query: 547 PA----LLTAALRRLEKGLEAL----QSDEPMVPVCVDGVMVAEVISGWTGIPVGKMMTD 598
            A    L    +  LE+ LE +    + +  ++   V    +AEV+S WTGIPV KM+  
Sbjct: 495 LARMAELQYGIIPDLERSLEMVDQHGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEG 554

Query: 599 ELHTVLNLKEKLAERVVGQDDALDAIARRVRTFRADLDDPGKPVGVFMLVGPSGVGKTET 658
           E   +L +++ L  RV+GQ +A+ A++  VR  RA L DP +P G F+ +GP+GVGKTE 
Sbjct: 555 ERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTEL 614

Query: 659 AFALADLLYGGERNVITVNMSEFQEAHTVSSLKGAPPGYVGYGRGGVLTEAVRRRPYSVV 718
             ALA+ L+  E  +I ++MSEF E H+V+ L GAPPGYVGY  GG LTEAVRR+PYSVV
Sbjct: 615 CKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVV 674

Query: 719 LLDEMEKAHPDVLELFFQVFDKGTMEDGEGVQIDFKNTLILLTSNAAQDVITQASQGGRR 778
           L+DE+EKAHPDV  +  QV + G + D  G  +DFKNT+I++TSN     I +       
Sbjct: 675 LMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQELV----- 729

Query: 779 PDPEELVERLRPELLKQFSPAFLGRL-ALVPYHHLGDEQIRSIVNLKLGKLARRFALNHH 837
            DP      +   +   F P F+ R+  +V +  LG EQI  I +++LG+L +R A    
Sbjct: 730 GDPGAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAEREL 789

Query: 838 AIFTWDEQVEDAITARCTEVDSGARNIDHILAHAVLPELSRQVL 881
           ++    E ++  I      V  GAR +   +   +   L++Q+L
Sbjct: 790 SLELSQEAMDKLIAVGYDPV-YGARPLKRAIQRWIENPLAQQIL 832