Pairwise Alignments

Query, 913 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

Subject, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

 Score =  678 bits (1749), Expect = 0.0
 Identities = 397/913 (43%), Positives = 545/913 (59%), Gaps = 69/913 (7%)

Query: 3   IDIRTLLGRLNPECKRAMEQAAELCVQQTHYNVDLEHLLLKLVDNDAPDLRLVFGRFSIR 62
           I++ TL+ +LN + K A+EQAA LC+++ H  V LE+ L  L+DN   D+RLV  +  + 
Sbjct: 4   IELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLE 63

Query: 63  PDTVQSQL------QKSLDTFKRGNGRTPSLAPDFAPLFQEAWLMSSMLLGQQHIRSGTL 116
            D V+  +      ++ LDT+       P+ +P    L QEAWL+SS  L Q  +RSG +
Sbjct: 64  VDQVKQAIASTYSREQVLDTY-------PAFSPLLVELLQEAWLLSSTELEQAELRSGAI 116

Query: 117 MLALLD-VDR-LRGRLVDAAPALLQIPRGTLRDELAGLLQSSPEDAAASALAAAPVAPAP 174
            LA L   DR L  +L+        I R  L+   A +L  S E A A     A      
Sbjct: 117 FLAALTRADRYLSFKLISLFEG---INRENLKKHFAMILSDSAETAVAKTDKNA------ 167

Query: 175 AASQHNPPNTPSLPDAGAPPLQMPTARRGSSATPSLDQYTVDMTQLARDGAIDPIRGRDG 234
                            A PLQ       ++A   L ++  ++T+ AR+G +DP+  R+ 
Sbjct: 168 -----------------ANPLQ-------AAAETPLGRFCTNVTEQARNGELDPVLSREN 203

Query: 235 EIRQIIDVLLRRRQNNPILTGEAGVGKTAVVEGFAQRVVQGDVPPALRQVSVRSLDLALL 294
           E+  ++D+L RRR+NNPI+ GEAGVGK+A++EG A RVV G VP  L+ V + SLDL  L
Sbjct: 204 ELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVELYSLDLGRL 263

Query: 295 QAGAGVKGEFENRLKSVIAEVKASPTPVILFIDEAHQLIGAGGAEGQGDAANLLKPALAR 354
           QAGA VKGEFE RLK VI  +K SP P+ILFIDEAH LIG+G  EG  DAANLLKPALAR
Sbjct: 264 QAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALAR 323

Query: 355 GELRTIAATTWAEYKKYVERDPALARRFQVVKVEEPSEEVAIDMLRGMVETLEKHHGVEI 414
           GEL T+AATTW EYKKY E+DPAL RRFQ+VK++EP+ + A+D+LRG+    EK H V I
Sbjct: 324 GELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLI 383

Query: 415 IDDAVREAVKLSHRYITGRQLPDKAISVLDTACARVAIGQNGLPAELESAARDIATGESE 474
            DDA++ A +LS RYI+GRQLPDKAI VLDTACAR+AI     P  L          + E
Sbjct: 384 TDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLE 443

Query: 475 LRVLRHEAATGGEHQDAIATLTAKLDALRQKH-------KRLSDKLDEEKHAVMEIVALR 527
           + +L      G E        + +LD LR +          L+    ++K  V  I+ALR
Sbjct: 444 IDMLERAQFLGQEVD------SERLDVLRNQELADEAEKAALTQSWQQQKSLVESIIALR 497

Query: 528 RKIADSLRDDAPPPDEENDPALLTAALRRLEKGLEALQSDEPMVPVCVDGVMVAEVISGW 587
            ++ +  +     PD      ++  AL+   + L+A+   E ++   VD   +AEVI+ W
Sbjct: 498 AELMELSQAQEQDPDH---LLVVRTALQEQYQALDAIDHAERLMHPQVDADQIAEVIADW 554

Query: 588 TGIPVGKMMTDELHTVLNLKEKLAERVVGQDDALDAIARRVRTFRADLDDPGKPVGVFML 647
           TG+PV +M TDELH + +L   L + + GQ+ A++ I R + T RADL  PG+P G F+L
Sbjct: 555 TGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLRRPGRPKGAFLL 614

Query: 648 VGPSGVGKTETAFALADLLYGGERNVITVNMSEFQEAHTVSSLKGAPPGYVGYGRGGVLT 707
           VGPSGVGKTET   LA+ LYGG++ + T+NMSE+QE HTVS L G+PPGYVGYG GGVLT
Sbjct: 615 VGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLT 674

Query: 708 EAVRRRPYSVVLLDEMEKAHPDVLELFFQVFDKGTMEDGEGVQIDFKNTLILLTSNAAQD 767
           EA+R+ PYSVVLLDE+EKAHP+VL +F+Q FDKG + DGEG  ID +N +  LTSN    
Sbjct: 675 EAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQ 734

Query: 768 VITQASQGGRRPDPEELVERLRPELLKQFSPAFLGRLALVPYHHLGDEQIRSIVNLKLGK 827
            I   +      +P +L E L PEL   F PA L R+ ++PY  LG E +  IV  KL +
Sbjct: 735 TIVDYAD-----EPAKLDEALYPELAAFFKPALLARMEVIPYLPLGKEVLAQIVRGKLAR 789

Query: 828 LARRFALNHHAIFTWDEQVEDAITARCTEVDSGARNIDHILAHAVLPELSRQVLERISMA 887
           L + F   ++A    +E + D I +R T  ++GAR ++ I+   +LP +S  +L +++  
Sbjct: 790 LEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPPVSLALLNKLAER 849

Query: 888 AAFTEVHMGMDGG 900
           A    + +  + G
Sbjct: 850 APVERIRLAAEAG 862