Pairwise Alignments

Query, 913 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score =  508 bits (1309), Expect = e-148
 Identities = 326/885 (36%), Positives = 477/885 (53%), Gaps = 65/885 (7%)

Query: 9   LGRLNPECKRAMEQAAELCVQQTHYNVDLEHLLLKLVDNDAPDLRLVFGRFSIRPDTVQS 68
           L R   + + A+  A  L + + H  ++  HL++ L+D +   +R +    ++    ++S
Sbjct: 3   LDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQLRS 62

Query: 69  QLQKSLDTFKR--GNGRTPSLAPDFAPLFQEAWLMSSMLLGQQ--HIRSGTLMLALLDVD 124
           +L + LD   +  G G    L+     LF    L   +   +Q  +I S   +LA ++  
Sbjct: 63  KLGEMLDRLPKVSGIGGDVQLSSALGSLFN---LCDKVAQKRQDAYISSEIYLLAAIE-- 117

Query: 125 RLRGRLVDAAPALLQIPRGTLRDELAGLLQSSPEDAAASALAAAPVAPAPAASQHNPPNT 184
                  D  P       G L  E  GL +    +A         V         N PN 
Sbjct: 118 -------DKGPL------GHLLKEF-GLTEKKVSEAIEKIRGGQKV---------NDPNA 154

Query: 185 PSLPDAGAPPLQMPTARRGSSATPSLDQYTVDMTQLARDGAIDPIRGRDGEIRQIIDVLL 244
             L  A                   L+++T+D+T+ A  G +DP+ GRD EIR+ I VL 
Sbjct: 155 EELRQA-------------------LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQ 195

Query: 245 RRRQNNPILTGEAGVGKTAVVEGFAQRVVQGDVPPALRQVSVRSLDLALLQAGAGVKGEF 304
           RR +NNP++ GE GVGKTA+VEG AQR++  +VP  LR   V SLD+  L AGA  +GEF
Sbjct: 196 RRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEF 255

Query: 305 ENRLKSVIAEVKASPTPVILFIDEAHQLIGAGGAEGQGDAANLLKPALARGELRTIAATT 364
           E RLKSV+ E+      +ILFIDE H ++GAG  EG  DA N+LKPALARGEL  + ATT
Sbjct: 256 EERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATT 315

Query: 365 WAEYKKYVERDPALARRFQVVKVEEPSEEVAIDMLRGMVETLEKHHGVEIIDDAVREAVK 424
             EY++Y+E+DPAL RRFQ V V+EP+ E  I +LRG+ E  E HH VEI D A+  A  
Sbjct: 316 LDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAAS 375

Query: 425 LSHRYITGRQLPDKAISVLDTACARVAIGQNGLPAELESAARDIATGESELRVLRHEAAT 484
           LSHRYI+ RQLPDKAI ++D A + + +  +  P  L+   R I   + E + L +E   
Sbjct: 376 LSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDE 435

Query: 485 GGEHQDAIATLTAKLDALRQKHKRLSDKLDEEKHAV---MEIVALRRKIADSLRDDAPPP 541
             E +  +A L  +L    + +  L +    EK A+     I A   +    L       
Sbjct: 436 ASEKR--LAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAG 493

Query: 542 DEENDPALLTAALRRLEKGL----EALQSDEPMVPVCVDGVMVAEVISGWTGIPVGKMMT 597
           D      L    +  LEK L    +A   +  ++   V    +AEV+S  TGIPV KM+ 
Sbjct: 494 DLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 598 DELHTVLNLKEKLAERVVGQDDALDAIARRVRTFRADLDDPGKPVGVFMLVGPSGVGKTE 657
            E   +L +++ L +RV+GQ +A++ +A  +R  RA L DP +P+G F+ +GP+GVGKTE
Sbjct: 554 AEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 658 TAFALADLLYGGERNVITVNMSEFQEAHTVSSLKGAPPGYVGYGRGGVLTEAVRRRPYSV 717
               LA+ L+  E  ++ V+MSEF E H+V+ L GAPPGYVGY  GG LTEAVRR+PYSV
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 718 VLLDEMEKAHPDVLELFFQVFDKGTMEDGEGVQIDFKNTLILLTSNAAQDVITQASQGGR 777
           +LLDE+EKAHPDV  +  QV D G + DG+G  +DF+NT++++TSN      ++  +   
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS---SRIQENFA 730

Query: 778 RPDPEELVERLRPELLKQFSPAFLGRL-ALVPYHHLGDEQIRSIVNLKLGKLARRFALNH 836
           R D + + E++   + K F P FL R+   V +H LG E I+SI +++L +L +R A   
Sbjct: 731 RLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERD 790

Query: 837 HAIFTWDEQVEDAITARCTEVDSGARNIDHILAHAVLPELSRQVL 881
           + +   D++  D I     +   GAR +   +   V   L++ +L
Sbjct: 791 YQLEV-DDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSIL 834