Pairwise Alignments

Query, 337 a.a., T6SS component TssG (ImpH/VasB) from Variovorax sp. SCN45

Subject, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 20/312 (6%)

Query: 5   LSARPQDFNLFQAISLLERAAPDAVPVGRSQGPREREA-VRLHAFVSLAFEASDVREVDT 63
           L    +++N +Q + LL++ A     +       ER+  +   A  SL F  SDV  ++ 
Sbjct: 24  LPGNVREYNFYQLVELLQKLAD----INPESEEWERDCRLVFSANPSLGFSPSDVMALE- 78

Query: 64  DAPTGEPFSLTTPALSLGGSGGPLPMPVTEMLLERRQRRDHATADFLDIFNHRFLAFLYR 123
            A   E + + T    L G+  PLP  + E L+   +        FLD FN+R +  +YR
Sbjct: 79  -ARDDERWVMLTNFFGLSGAQSPLPGFILEQLVT--EEPGGYKQPFLDFFNNRLINLVYR 135

Query: 124 SRRKHHVALNPHSPSSSTLASTLDAASALG---LRSGVRAPDGSALWLRHAGLLGG---A 177
             RK+   +     +    ++ L A   LG   LR     P      L +AG L G   +
Sbjct: 136 VWRKYRYYVRFQPGAQDVFSAQLFALVGLGDPDLRG--ETPINWCKMLAYAGTLAGRSRS 193

Query: 178 PRGMTALLALLRDRLGVQVQGTQFRGRWLALEPDASARLDMRTP-LGGGAVLGKRVWDQG 236
           P+ +  ++A   D   V ++  Q+  R ++++      L  +   LG   V+G+ V D  
Sbjct: 194 PQVVAGIIAHCFDLPDVSIR--QWVRRRVSIDRSQQLALGKQNARLGMDTVIGESVIDCS 251

Query: 237 AGIRLTFSDLSQQRLRDLLPRGADHALAKWLVRRFIPQDLKVEMELQLAPAERRSSLLGA 296
               +    LS+ R  D LP G ++     LV   + + +  ++EL +   E     L  
Sbjct: 252 GKFIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYDLELAMDEREAPLFCLDT 311

Query: 297 ANPMRLGWTSWV 308
              + LGWTS++
Sbjct: 312 RQNIALGWTSFL 323