Pairwise Alignments

Query, 150 a.a., CBS domain protein from Variovorax sp. SCN45

Subject, 142 a.a., CBS domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 44.7 bits (104), Expect = 6e-10
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 12/131 (9%)

Query: 2   KVSDILRVKGNTLFTITPDDPLAHAANTMAEKDIGSLVVMEHGDLVGMLTFREVIVAIVN 61
           +VS+I+  +   + TI  DD L              L+V+E+  L G+L+ R+ +  +  
Sbjct: 4   RVSEIMSTR---VVTIEMDDRLTIVKEIFDSAPFHHLLVIENDSLQGVLSERDYLRTLSP 60

Query: 62  NGGQVGTT------LVRKA---MDDAPVTCTLETDLDEIRRIMLERHARYMPVMDKRMLM 112
           + G +G T      L R+A   M   P+T   E D+    ++ML      +PVM    ++
Sbjct: 61  HIGSIGETERDSDTLQRRAHQVMSRDPITIAPEADIKTAGQLMLAHDIGCLPVMAFSKIV 120

Query: 113 GVISFYDVAKA 123
           G+I++ D+ +A
Sbjct: 121 GIITWKDLLRA 131



 Score = 32.3 bits (72), Expect = 3e-06
 Identities = 15/47 (31%), Positives = 27/47 (57%)

Query: 16  TITPDDPLAHAANTMAEKDIGSLVVMEHGDLVGMLTFREVIVAIVNN 62
           TI P+  +  A   M   DIG L VM    +VG++T+++++ A  ++
Sbjct: 89  TIAPEADIKTAGQLMLAHDIGCLPVMAFSKIVGIITWKDLLRAFCHD 135