Pairwise Alignments

Query, 150 a.a., CBS domain protein from Variovorax sp. SCN45

Subject, 143 a.a., acetoin utilization protein AcuB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.4 bits (111), Expect = 9e-11
 Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 12/130 (9%)

Query: 3   VSDILRVKGNTLFTITPDDPLAHAANTMAEKDIGSLVVMEHGDLVGMLTFREVIVAI--- 59
           ++DI+  +   + T+  DD L  A +   + +   L+V++   L G+L+ R+++ AI   
Sbjct: 5   IADIMCTR---VVTVEMDDRLTVAKDIFEQANFHHLLVLDEYKLEGVLSERDLLRAISPN 61

Query: 60  VNNGGQVGTTL------VRKAMDDAPVTCTLETDLDEIRRIMLERHARYMPVMDKRMLMG 113
           + NG +    L      + + M   PVT      LD   R +LE +   +PV++   L+G
Sbjct: 62  LGNGAETSKDLETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLENGDLVG 121

Query: 114 VISFYDVAKA 123
           ++++ D+ +A
Sbjct: 122 IVTWKDLLRA 131



 Score = 23.1 bits (48), Expect = 0.002
 Identities = 12/45 (26%), Positives = 25/45 (55%)

Query: 80  VTCTLETDLDEIRRIMLERHARYMPVMDKRMLMGVISFYDVAKAV 124
           VT  ++  L   + I  + +  ++ V+D+  L GV+S  D+ +A+
Sbjct: 14  VTVEMDDRLTVAKDIFEQANFHHLLVLDEYKLEGVLSERDLLRAI 58