Pairwise Alignments

Query, 155 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) from Variovorax sp. SCN45

Subject, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

 Score = 74.3 bits (181), Expect = 8e-19
 Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 5/159 (3%)

Query: 1   MKLLVVAVGQRMPDWAQTAWDDYAKRFPPELKLELRAVKTE--PRGSKSLET--LYAAER 56
           M + +++VG+    +   A  +Y+KR     KL++  V  E  P     +E   +   E 
Sbjct: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60

Query: 57  ERIEGAIARGMRIVVLDERGTALTTKALAARLQSWQGEG-DDVALVIGGPDGLDPAFKAA 115
           ERI   + +   ++ L+  G  LT++ LA ++      G  D+  VIGG  GL       
Sbjct: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120

Query: 116 AHERIRLSDLTLPHAMARVLLVEQLYRAWSVNAGHPYHR 154
           +  ++  S +T PH + RV+L+EQ+YR++ + +G PYH+
Sbjct: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159