Pairwise Alignments

Query, 508 a.a., Ribonuclease G from Variovorax sp. SCN45

Subject, 1052 a.a., ribonuclease E from Vibrio cholerae E7946 ATCC 55056

 Score =  263 bits (673), Expect = 2e-74
 Identities = 163/481 (33%), Positives = 258/481 (53%), Gaps = 25/481 (5%)

Query: 1   MQDILINWSP-QETRVALVEHGAVQELHVERTLERGLVGNIYLGKVSRVLPGMQSAFIDI 59
           M+ +LIN +  +E RVALV+   + +L +E         NIY G+++R+ P +++AF+D 
Sbjct: 1   MKRMLINATQKEELRVALVDGQRLFDLDIESPGHESKKANIYKGRITRIEPSLEAAFVDY 60

Query: 60  GLERTAFLHVADIVAPFTPGSRPSAPAPERDHRNGGPMVPIEKQVFEGQSLLVQVIKDPI 119
           G ER  FL + +I   + P        P            I+  + EGQ ++VQ+ K+  
Sbjct: 61  GAERHGFLPLKEIAREYFPDGYSYQGRPN-----------IKDVLNEGQEVIVQIEKEER 109

Query: 120 GTKGARLSTQISIAGRLLVFLPQDNHIG-VSQKIPSDQRESLRNRMLALIEAAAAADSGG 178
           G+KGA L+T IS+AG  LV +P +   G +S++I  D+R  L++ + +L           
Sbjct: 110 GSKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERTELKSALSSL----------- 158

Query: 179 VVPANTGGFILRTNGEDSSDPELAEDIAYLRKTWSRIREASMRMPPMSLLHQDLSLLQRV 238
            +P   G  I+RT G   S  EL  D+  L K WS I++AS   P   L+HQ+ +++ R 
Sbjct: 159 ELPQGMG-LIVRTAGVGKSAEELEWDLNVLLKHWSAIKQASDSNPAPFLIHQESNVIVRA 217

Query: 239 LRDMTSEDTQTIRIDSREQFEVLLKFGLEFMPKAAGKLQHYKGERPIFDLYSVDEEIAKA 298
           +RD    D   I IDS   +E  L+      P    +++ Y+GE P+F  + ++ +I  A
Sbjct: 218 IRDYLRRDIGEILIDSNSIYERALEHIRLVRPDFVNRVKKYEGEVPLFSHFQIESQIESA 277

Query: 299 LGRRVELKSGGYLVVDQTEALTTVDVNTGGFVGARNFDDTIFKTNLEAAQAIARQLRLRN 358
             R V L SGG +V+D TEALT++D+N+       + ++T   TNLEAA  IARQLRLR+
Sbjct: 278 FQREVRLPSGGSIVIDPTEALTSIDINSARATKGGDIEETALNTNLEAADEIARQLRLRD 337

Query: 359 LGGIIIVDFIDMGRDDHREQVLGEFRKQLARDRVKTTAGGFSQLGLVEMTRKRTRESLAH 418
           LGG++++DFIDM    H+ +V    R+ +  DR +   G  S+ GL+EM+R+R   SLA 
Sbjct: 338 LGGLVVIDFIDMTPVRHQREVENRLREAVRVDRARVQIGRISRFGLLEMSRQRLSPSLAE 397

Query: 419 MLCEPCAACGGQGIVKTARSVAYDVMREILREARQFTPREFRIVSSPQVIELFLDEESQH 478
                C  C G G+++   S+A  V+R I  EA +    +   V    +    L+E+ + 
Sbjct: 398 ASHHICPRCKGTGVIRDNESLALSVLRLIEEEALKDNTSQVLAVVPVSIASYLLNEKRRS 457

Query: 479 L 479
           +
Sbjct: 458 I 458