Pairwise Alignments

Query, 508 a.a., Ribonuclease G from Variovorax sp. SCN45

Subject, 1098 a.a., RNAse E (RefSeq) from Shewanella sp. ANA-3

 Score =  263 bits (673), Expect = 2e-74
 Identities = 163/477 (34%), Positives = 250/477 (52%), Gaps = 25/477 (5%)

Query: 1   MQDILINWSP-QETRVALVEHGAVQELHVERTLERGLVGNIYLGKVSRVLPGMQSAFIDI 59
           M+ +LIN +  +E RVALV+   + +L +E         NIY GK++RV P +++AF+D 
Sbjct: 1   MKRMLINATQSEELRVALVDGQQLYDLDIESPGHEQKKSNIYKGKITRVEPSLEAAFVDY 60

Query: 60  GLERTAFLHVADIVAPFTPGSRPSAPAPERDHRNGGPMVPIEKQVFEGQSLLVQVIKDPI 119
           G ER  FL + +I   + P        P            I++ V EGQ ++VQ+ K+  
Sbjct: 61  GAERHGFLPLKEIAREYFPKGYSFQGRPN-----------IKEVVSEGQEVIVQIDKEER 109

Query: 120 GTKGARLSTQISIAGRLLVFLPQDNHIG-VSQKIPSDQRESLRNRMLALIEAAAAADSGG 178
           G KGA L+T IS+AG  LV +P +   G +S++I  D+R  L+  M  L           
Sbjct: 110 GNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERTELKEAMADL----------- 158

Query: 179 VVPANTGGFILRTNGEDSSDPELAEDIAYLRKTWSRIREASMRMPPMSLLHQDLSLLQRV 238
            VPA  G  I+RT G      EL  D+  L+  W+ I EA+   P   L+HQ+ +++ R 
Sbjct: 159 EVPAGMG-LIVRTAGVGKESTELKWDLKVLQHHWAAITEAAQSKPAPFLIHQESNVIVRA 217

Query: 239 LRDMTSEDTQTIRIDSREQFEVLLKFGLEFMPKAAGKLQHYKGERPIFDLYSVDEEIAKA 298
           +RD    D   I ID    FE   +      P    +++ Y+ E P+F  + ++ +I  A
Sbjct: 218 IRDYLRRDVGEILIDHPRIFEEAKQHIALVRPDFVERVKLYEAEVPLFTHFQIESQIESA 277

Query: 299 LGRRVELKSGGYLVVDQTEALTTVDVNTGGFVGARNFDDTIFKTNLEAAQAIARQLRLRN 358
             R V L SGG +V+D TEALT++D+N+       + ++T   TNLEAA  IARQLRLR+
Sbjct: 278 FQREVRLPSGGSIVIDPTEALTSIDINSARATKGGDIEETALNTNLEAADEIARQLRLRD 337

Query: 359 LGGIIIVDFIDMGRDDHREQVLGEFRKQLARDRVKTTAGGFSQLGLVEMTRKRTRESLAH 418
           LGG++++DFIDM    H+ +V    R  +  DR +   G  S+ GL+EM+R+R R SL  
Sbjct: 338 LGGLVVIDFIDMTPVRHQREVENRLRDAVHHDRARVQLGRISRFGLMEMSRQRLRPSLEE 397

Query: 419 MLCEPCAACGGQGIVKTARSVAYDVMREILREARQFTPREFRIVSSPQVIELFLDEE 475
                C  C GQG +++  S+A  ++R +  EA +    +   +    V    L+E+
Sbjct: 398 SAAHICPRCHGQGTIRSTESLALSILRLMEEEAIKENTSQIEAIVPVDVAAFLLNEK 454