Pairwise Alignments

Query, 555 a.a., Lipid A export permease/ATP-binding protein MsbA from Variovorax sp. SCN45

Subject, 601 a.a., lipid ABC transporter permease/ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  300 bits (767), Expect = 1e-85
 Identities = 182/548 (33%), Positives = 296/548 (54%), Gaps = 9/548 (1%)

Query: 1   MLAAITEPLMAALLKPLLDRGFT--RGEMPLWFVPAAVLLLFAVRGIAQFISQYALSRIA 58
           M+ A T    A + + +++  F   RG++ L  V  ++   F +RG+A +    ALS+I 
Sbjct: 43  MVVAATTAFTAWISETVINEAFAHKRGDVVL-LVCFSIFAAFVLRGLATYGQAVALSKIG 101

Query: 59  NEGMQKLRRVMFERLLGAELALFTRQSASALSNTVVYEVQTGAMLLVQALLGLSRDGFTL 118
           N  +   +R ++  L+   +  F  + ++ L+  +   +     +L   +  ++RD  TL
Sbjct: 102 NSIVASYKRRLYTHLMALSIGFFQEKRSAHLTAKINQNISGIRDVLNMTVTSVARDVLTL 161

Query: 119 IALLGYLVYLNWKLTLIVAFLVPSISWIMKVFSKRLYRLTQQGQQATDELAYVVEENVLA 178
           + L+G ++  +W L+LI     P +   ++  S+RL   T++  +A   +   ++E +  
Sbjct: 162 VGLVGVMISKDWLLSLITFVGAPPLLLGLRYISRRLRLATREAVEANSRVLGAMQETIQG 221

Query: 179 HRVVRLHGAEGAQGRRFEQLSQRLNRLAVKSTIAQAATTPLTQMMASLALSVVVMIALWQ 238
             +V+    E   GR+ E + +     A +       T PLT+  A LA+S V+  A ++
Sbjct: 222 ISIVKAFTMEDELGRKVEGIIKGAENRANRIARLSERTAPLTETFAGLAISGVLAYAAFR 281

Query: 239 SGKQGFTVGGFVAYITAMLMLIAPIRRLAEVAGPITRGLAALERGLVLIDEVAPESQ--G 296
           +       G   A++TA+L+   P+RRLA +   + R          ++D V  +    G
Sbjct: 282 TIYSNVAPGALFAFVTALLLAYDPVRRLARLQVSLERAAVNARMLYEILDTVPHQRDLPG 341

Query: 297 TFRIEHAEGRIELRNVQVSYRGDDEQRALDGVNLTIEPGQVVAFVGPSGSGKTTLVNLLP 356
             ++  +E  +E R+V+ SY   +E   L GV+   E G+  A VGPSG+GK+T+++L+P
Sbjct: 342 ARQLAFSEATVEFRDVRFSYGNGEE--VLKGVSFLAEGGKTTALVGPSGAGKSTIISLIP 399

Query: 357 RFVQPSSGQVLLDGHDTSEWELKSLRAQFAMVSQDVVMLNETLAANVALGS-EIDRERVL 415
           RF  P SG +L+DG D +    +SLR   A VSQ   +   ++  N+  G  E     V 
Sbjct: 400 RFYDPQSGVILIDGQDIAAVTKQSLRNGLAYVSQQAYLFEGSIRDNIRYGRPEATDAEVE 459

Query: 416 QCIDAANLSSHVENLPQGIDTVLGHNATQLSGGQRQRLAIARALYKNAPVLLLDEATSAL 475
           +    A     +   PQG DT +G     LSGGQRQRL+IARAL +NAP+LLLDEATSAL
Sbjct: 460 EAARLAYAHDFILAQPQGYDTPVGEQGMTLSGGQRQRLSIARALVRNAPILLLDEATSAL 519

Query: 476 DTESERLVQDALQRLMQNRTTLIVAHRLSTIQHADRIIVMEQGRIAEQGSHEQLMQL-DG 534
           DTESE  VQ AL + M  RT +++AHRLST+ +AD+I+VM +G + E+G+HE+L +  DG
Sbjct: 520 DTESEAAVQKALDQAMSGRTVIVIAHRLSTVVNADKIVVMNEGLVVEEGTHEELARRPDG 579

Query: 535 LYARLQTL 542
           +YARL  +
Sbjct: 580 VYARLHNI 587