Pairwise Alignments

Query, 430 a.a., FIG002076: hypothetical protein from Variovorax sp. SCN45

Subject, 423 a.a., yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) from Shewanella amazonensis SB2B

 Score =  469 bits (1208), Expect = e-137
 Identities = 226/427 (52%), Positives = 315/427 (73%), Gaps = 6/427 (1%)

Query: 4   LQQIIDRRLSGKNKSIGNRERFLRRYKGQIQEAVRRAVSGRNIRELEQGEDVTLPRHDVS 63
           +   IDRRL+ K KS  NR+RF+ RYK QI++AV  AV+ R++ ++++GE +++P  D++
Sbjct: 1   MANFIDRRLNAKGKSTVNRQRFINRYKKQIKKAVSDAVTRRSVTDVDKGEQISIPTRDIT 60

Query: 64  EPVFGHARGGDREYVHPGNQEYLKGDRIKRP-EGGGGGGSGSGEASDSGEGEDDFVFRLT 122
           EP+F   RGG RE VHPGN ++ +GDRI RP +GGGG GSG G+ASDSG+G+DDFVF+++
Sbjct: 61  EPMFHQGRGGFRERVHPGNDQFTRGDRIDRPPQGGGGQGSGQGDASDSGDGQDDFVFQIS 120

Query: 123 REEFMRVFFDDLALPHLIRTQIADVPEWKSHRAGFTSDGSPNNLHVVRSMRGALARRIAL 182
           ++E++ + F+DL LP+L R ++  + E++  RAG+T+DG P N+ +VRS+R +LARR A+
Sbjct: 121 KDEYLELLFEDLELPNLQRNRLNKLVEYQVQRAGYTNDGVPANISIVRSLRSSLARRTAM 180

Query: 183 GGEPRKELKRLEAHLEQLKQHPQAAQALIQNEIRETEERIEELRRTMRHVPYIDPIDLRY 242
               ++ LK LEA LE+L+  P A      + I   +  IE LR+ +  VP+ID  DLRY
Sbjct: 181 TAAKKRHLKTLEAELEELENTPGANA----DRILALKTEIEALRKKIDAVPFIDTFDLRY 236

Query: 243 RNRVKTPVPSAKAVMFCLMDVSGSMDEARKDMAKRFFMLLYMFLTRHYEKIDLVFLRHHT 302
            N  K  VPS++AVMFCLMDVSGSMD+A KDMAKRF++LLY+FLTR Y+ +++V++RHHT
Sbjct: 237 NNFTKREVPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLTRTYKNLEVVYIRHHT 296

Query: 303 QAQEVTEEEFFHATETGGTVVSSALVLMDEIIKARYPSGEWNVYGAQASDGDNWHQDSGR 362
           QA+EV E EFF++ ETGGT+VSSAL LM EI K RYP+ EWN+Y AQASDGDNW  DS  
Sbjct: 297 QAKEVDEHEFFYSQETGGTIVSSALKLMVEIQKERYPAEEWNIYAAQASDGDNWADDSPT 356

Query: 363 CRELLVDNILPVVRYYAYVQVA-ETEQNLWQEYQQLEGVQPNFAMRKVSDAQDIYPVFRD 421
           CR++L   ILP VRY++Y+++     Q LW+EY  L  V  N A++ +  A+DIYPVFR+
Sbjct: 357 CRQILEKQILPTVRYFSYIEITNRAHQTLWREYDSLRQVYDNMAVQHIRQAEDIYPVFRE 416

Query: 422 LFKKEGV 428
           LFKK+ V
Sbjct: 417 LFKKQAV 423