Pairwise Alignments

Query, 450 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 426 a.a., DedA family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  229 bits (584), Expect = 1e-64
 Identities = 141/441 (31%), Positives = 232/441 (52%), Gaps = 33/441 (7%)

Query: 9   SFVLFLLLGM------PVAFAIGLSCLATFAYEG-LPFETAIQMMVSGMNVFSFLAIPFF 61
           + VLF +LG+      P+  A+G S  A    +G +    A+Q + +G + F  LA+P F
Sbjct: 3   ALVLFGMLGLLFACNAPIMLAVGASAFAALLIKGGMDPMVAVQRLYAGADSFPLLAVPLF 62

Query: 62  IFSGELMLHGGIADKIVAFARSLVGHWKGGLGLANVVASTLFGGVSGSPVADTSAMGGVM 121
           + +G+LM  GGI+ +IV  A +LVGH  GGL + +VV+S  F GVSGS  ADT+A+G ++
Sbjct: 63  MTAGQLMSAGGISQRIVRLADTLVGHLPGGLAVVSVVSSMFFAGVSGSAAADTAAVGSIL 122

Query: 122 IPIMKREGYSAAYAVNVTTHASLSGALMPTSHNMIIYAFAAQAAVGTIDGHIIKGVSIGD 181
           IP M   GYS A+A  V   A   G ++P S  MI++               + G SIG 
Sbjct: 123 IPSMVARGYSPAFAGAVQAAAGSIGVVIPPSIPMIVFG-------------ALTGASIGK 169

Query: 182 LMFAGLIPVFWIMVCMLVAAYWQAAKHGYPKRTDGSTMLERFPGWGMVGKTFLAAIPGLM 241
           L   G++P   + + +      +  + G   R        RF     V    L A   L 
Sbjct: 170 LFAGGVMPGLLMGITLSAWCVHEGLRSGRETR--------RFEP-AAVWPALLRAGWSLG 220

Query: 242 VIVIILVCVMQGVATATEAAAIAVTYSLLLTVVAYRTMTREKLFKSLAKASKTTGVILLL 301
              IIL  ++ GV TATEAAA+AV Y+ L+ + A+R +   +L   L  A+ T+GV++ +
Sbjct: 221 APAIILGGIISGVCTATEAAAVAVVYAFLVGLFAHRELDLRRLPALLLDAAVTSGVVMSI 280

Query: 302 IGVSNMLRYQMAYLEIPDAIETVLLAATTSPWLMLLYINIIQIFLGIFLDMAAHILITTP 361
           I  +++  + MA   IP A+   +LA     W++LL +NI+ +  G  L+  A +++  P
Sbjct: 281 IAAASLFGWVMAIERIPAALADAILAVGGEGWMLLLAVNILLLLAGTMLETTAALILLVP 340

Query: 362 LFLPLAIQMGVGPVQFGMMLLLNCALGLVHPPVGTVQFIGCAIGKISIGEATKTAWPYYL 421
           + + L  +MG+  +  G+++++N ++G++ PP+G    + C I ++ +    +   P   
Sbjct: 341 VLVQLLPRMGIDLIHLGVIVVMNLSIGMLTPPLGVCLMVSCGIARVPLATLARAVLPLLA 400

Query: 422 AIFIAITLVTYVP----AFST 438
            + + + LVTY+P    AFST
Sbjct: 401 VLVVDLMLVTYIPWFVAAFST 421