Pairwise Alignments

Query, 408 a.a., Tol-Pal system beta propeller repeat protein TolB from Variovorax sp. SCN45

Subject, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  311 bits (797), Expect = 2e-89
 Identities = 162/406 (39%), Positives = 249/406 (61%), Gaps = 21/406 (5%)

Query: 21  PIALVPFK--GQESSPQKISDIVQADLERSGQFRGVDASG---QALDEASRPDLSLWRQR 75
           PIA++PF+  G  + PQ I+D+V +DL RSG F+ +D  G   + +   ++ D + W   
Sbjct: 36  PIAVMPFQWQGAGAPPQAIADVVMSDLVRSGTFKPLDELGLPQRGIGALAQFDANAWTNV 95

Query: 76  TADSLVVGSVSRLADGRFDVRFRLWDVVKGQD-------------LGGQSYTVPQGDLRL 122
           +A++LVVGSV      +F V F L D+VK Q+             +  +   +     R 
Sbjct: 96  SAEALVVGSVKPYGADQFLVSFELIDLVKAQNQALKGSANPTELLMDSRQTVISATQFRQ 155

Query: 123 ASHRIADYVYEKLTGEKGIFSTRIAYVTKAGSR---YSLWVADADGENAQAALASPEPII 179
             HRI+D VYEKLTG +G F TRI+YV    S+   YSL +AD DG N Q  L SPEP++
Sbjct: 156 YGHRISDIVYEKLTGIRGAFLTRISYVVVNHSQKAAYSLMIADYDGYNEQMLLRSPEPLM 215

Query: 180 SPCWSSNGQQLAYVSFESRKPVVYVHNVASGQRRLLANFKGSNSAPAWAPDGNSLAVTLS 239
           SP WS +G++LAYVSFE++K  ++V ++ +  R  +++F G N AP+++PDG SLAVTLS
Sbjct: 216 SPAWSPDGRRLAYVSFENKKAEIFVQDLYTQVRTKVSSFSGINGAPSFSPDGKSLAVTLS 275

Query: 240 RDGGSQLFTIPASGGEPRRLTQSSSIDTEPAFSADGSTIYFVSDRGGAPQIYKMSASGGN 299
           +DG  +++ I  +    +R+T   SIDTEP++  DG ++ F S+RGG PQ+Y++  + G 
Sbjct: 276 KDGQPEIYVIDIATKAIKRITNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGK 335

Query: 300 PTRVTFSGTYNISPAVSGDGRWLAYISRVGGAFKLHVMELASGNVSAITDTSADESPSFA 359
            TR TF G +N+  +++ DGR + +++R  G F +  M+L++  +  +T T  DESPS A
Sbjct: 336 VTRETFEGEWNLGGSITPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVA 395

Query: 360 PNSKLIVYATQLQGREALMTTTLDGKIKARLAGQAGDIREPDWGPF 405
           PN  +++Y T  QG++ L   + DG+ KARL    G+++ P W PF
Sbjct: 396 PNGTMVIYGTTHQGKQVLAAVSTDGRFKARLPAGQGEVKSPSWSPF 441