Pairwise Alignments

Query, 164 a.a., no description from Variovorax sp. SCN45

Subject, 212 a.a., dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data) from Shewanella loihica PV-4

 Score = 45.4 bits (106), Expect = 6e-10
 Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 10/157 (6%)

Query: 11  LSRWAMYIACVCLVGLLA----VVVYGVVLRYVFNDAPPYVEQVALLLVISVAMFGASAG 66
           +SR+  +I  V L  L+     +V   V+ R+ FN    +++++ L +     +FG S G
Sbjct: 2   MSRFFSHIEEVVLNALITAMTLLVFVEVIARFFFNTGFLWIQELTLTICGWFVLFGMSYG 61

Query: 67  VRDAGHIGLDSLVKALPPKAQFWCKALTYVLTIGFAIALFAGGAEMAVSTRESTIPTLGL 126
           V+   HIG+D+ VK LP + + +   L   + + +      G  +      +  +P   +
Sbjct: 62  VKVGAHIGVDAFVKKLPAQGRKYTAILAVAICLIYCGMFLVGSWDYLAKMYQIGVPMEDI 121

Query: 127 SEAVRYVPILFAGVLITLFSIEHLAAQFTGQKVVPSW 163
                 +P    G L   F+ E+L      +  VP W
Sbjct: 122 D-----LPHFLIGGLDGDFAWEYLRID-VEEPAVPLW 152