Pairwise Alignments

Query, 330 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 14/315 (4%)

Query: 1   MKSLQMKKLSGLIAI--GLIALTASNVTTARTFRSAEVHAKDFPTNQAVKFMGDELSKAT 58
           M S + K  +  +A    L+A TA   T  +          D   ++ V+ +  E++ A 
Sbjct: 1   MSSFRRKLTTSAVAAICSLVASTAGAQTVLKASHQFPGGKGDI-RDEMVQLIAREVAAAN 59

Query: 59  GGKDNIKIFADSSLGSEKDTVEQVKIGALDMVRVSSASFHGIVPESVIPSLPFLFRDIEH 118
            G + I++F  SSL    D    V  G LDM         G  PE     +P L  + + 
Sbjct: 60  VGLE-IQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDR 118

Query: 119 FRKAMYGPTGDKVLAAFEKAGFIGLCMYESGARSVYAKKP--IKSVADMKGLKIRVQPSD 176
             +         +    E AG   L + ++     +A K   I S   +KG  IR     
Sbjct: 119 AMRLNDSEFMGDIKKVIENAG--ALVIADAWLSGAFASKKNCITSPDTIKGQVIRAAGPA 176

Query: 177 LMVSLVSAAGASPTPMPIAEVYTGLKTGLVDAAENNYPSYEEAKHFEAAPVYS----ETM 232
               LV A GAS + MP +E+YTG++TG++DAA  +  S+   + FE A   +      +
Sbjct: 177 FEEMLVEA-GASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENAL 235

Query: 233 HVMTPEVLVFSKKIWDTLTKEEQAAIRKAAKDSVPYYVKLWEPREKDAKAAVIKGGAKIV 292
             M   VLV SK+++D LT+E+Q AI  A + +  Y+ +     ++       K G ++V
Sbjct: 236 WFMYEPVLV-SKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQVMIDTYKKAGVEVV 294

Query: 293 AASEIDRKGFVDVEK 307
             S+ D   ++++ K
Sbjct: 295 EMSKEDYDAWLELAK 309