Pairwise Alignments

Query, 330 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 330 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  103 bits (257), Expect = 6e-27
 Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 5/282 (1%)

Query: 19  ALTASNVTTARTFRSAEVHAK-DFPTNQAVKFMGDELSKATGGKDNIKIFADSSLGSEKD 77
           A   +   +A   R A V A+ D  T  A +   + ++ ATGG+  + ++  S LG   +
Sbjct: 17  AALLAGAASATELRYAHVGAEGDIQTVYAAQ-AAEGIAAATGGEVTVTVYPASQLGGVAE 75

Query: 78  TVEQVKIGALDMVRVSSASFHGIVPESVIPSLPFLFRDIEHFRKAMYGPTGDKVLAAFEK 137
            V+ V++G++ M     AS   +VPE  + + PF++RD  H   A    +   + A  EK
Sbjct: 76  MVDGVRMGSISMGHHDFASLARLVPEVAVFNAPFIYRDGAHALAATDPQSSPALQAINEK 135

Query: 138 AGFIGLCMYES---GARSVYAKKPIKSVADMKGLKIRVQPSDLMVSLVSAAGASPTPMPI 194
               G+ +      G R + +  P+K+ AD+ G   R  P +L VS+V   GA PTP+ +
Sbjct: 136 LIAQGVRIVGRIYRGDRHISSNFPVKTPADLAGKPFRAVPLELWVSMVKGFGAIPTPVEV 195

Query: 195 AEVYTGLKTGLVDAAENNYPSYEEAKHFEAAPVYSETMHVMTPEVLVFSKKIWDTLTKEE 254
           AE+ T L TG+V   EN           E     S T H+     +  ++++W  L++E+
Sbjct: 196 AELPTALMTGVVVGQENPLTRIASNNLNEVQSHLSMTGHMRAVLAVFINEEVWQGLSEEQ 255

Query: 255 QAAIRKAAKDSVPYYVKLWEPREKDAKAAVIKGGAKIVAASE 296
           + A+ K   +     +K+    E D    +   G  ++  +E
Sbjct: 256 RTALTKVLDEEAQKSLKMATESEADLVKELKGRGMTVITEAE 297