Pairwise Alignments

Query, 330 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 4/262 (1%)

Query: 9   LSGLIAIGLIALTASNVTTA---RTFRSAEVHAKDFPTNQAVKFMGDELSKATGGKDNIK 65
           L G+ A   ++L   ++  A   RT R   V     P N A   +G+ L   T G+ +I 
Sbjct: 9   LGGVAAGAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKAETNGRLSIS 68

Query: 66  IFADSSLGSEKDTVEQVKIGALDMVRVSSASFHGIVPESVIPSLPFLFRDIEHFRKAMYG 125
           +F    LG+E   ++Q++ GALD+  + +A     +P     + P++        K +  
Sbjct: 69  VFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAKVAKLVRE 128

Query: 126 PTGDKVLAAF-EKAGFIGLCMYESGARSVYAKKPIKSVADMKGLKIRVQPSDLMVSLVSA 184
           P   K+L     + G +GL    +  R V++ K I  + D+ G+K+R+  +         
Sbjct: 129 PVAMKLLDVLPAETGTVGLAWGITTMRVVFSAKEIAGLDDINGMKLRINTTPAYRDFYQL 188

Query: 185 AGASPTPMPIAEVYTGLKTGLVDAAENNYPSYEEAKHFEAAPVYSETMHVMTPEVLVFSK 244
            GA+PTP+P   V+  +  G VD  E +       +  + +    +   +  P V + S 
Sbjct: 189 LGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNAIFMPCVALASG 248

Query: 245 KIWDTLTKEEQAAIRKAAKDSV 266
           ++W TL + ++  I +  K ++
Sbjct: 249 RVWQTLPEADREIIARLTKSAL 270