Pairwise Alignments

Query, 330 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 323 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  121 bits (303), Expect = 3e-32
 Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 7/305 (2%)

Query: 10  SGLIAI---GLIALTASNVTTARTFRSAEVHAKDFPTNQAVKFMGDELSKATGGKDNIKI 66
           +G+I++   GL+  + +    ART R         P  + V      + + +GG+  ++I
Sbjct: 3   TGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTLEI 62

Query: 67  FADSSLGSEKDTVEQVKIGALDMVRVSSASFHGIVPESVIPSLPFLFRDIEHFRKAMYGP 126
           F +S LG+  + +EQV +G LD            VP +V+ S  ++  D +H +K +   
Sbjct: 63  FPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIASD 122

Query: 127 TGDKVLAAFE-KAGFIGLCMYESGARSVYAKKPIKSVADMKGLKIRVQPSDLMVSLVSAA 185
            G  ++     +  +  +  +  G R   AKKPI+  AD  G+K+RV  S  +++   A 
Sbjct: 123 WGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAKAM 182

Query: 186 GASPTPMPIAEVYTGLKTGLVDAAENNYPSYEEAKHFEAAPVYSETMHVMTPEVLVFSKK 245
           GASPTP+  AEVY  L+T  VD  EN  P  +  K  E     S T H++  +V++ S+ 
Sbjct: 183 GASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMSED 242

Query: 246 IWDTLTKEEQAAIRKAAKDSVPYYVKLWEPREKDAKAAVIKGGAKIVAASEIDRKGFVDV 305
            W+ L   +Q  + +A +       KL   +E +  +   + G  +V   E D+  F + 
Sbjct: 243 TWNALEPADQKVVMEAFEAGGALNDKLVSDKEANLVSDFRERGITVV---EPDKAAFQEA 299

Query: 306 EKPVW 310
            KPV+
Sbjct: 300 MKPVY 304