Pairwise Alignments

Query, 264 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 265 a.a., ABC transporter periplasmic substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  165 bits (417), Expect = 1e-45
 Identities = 88/247 (35%), Positives = 139/247 (56%), Gaps = 2/247 (0%)

Query: 14  LALVAGVAQAAMADQLDDIKKAGKVRVAIAMGTPLFSFADANLQPTGSDVDTATALAKDL 73
           LA+  G A A+ A  LDDI    KV + + +  P F   +  +QP G DVD A  LAKDL
Sbjct: 16  LAITVGAATAS-ASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPDGLDVDVAKLLAKDL 74

Query: 74  GVKLEIVSITNAARVPTLQAQRADLVIADLSITPEREKVVDFSVPYAVISIIVGGPKSIK 133
           GV+LE+V +T  +R+P+LQ  + D V+A   I  ER   V FS PY     I+  PK   
Sbjct: 75  GVELELVPVTGQSRIPSLQTGKVDFVVASFGIYTERALSVAFSNPYGGHRSIIIAPKEAT 134

Query: 134 VTDYADLNGKRIGLTRATVND-TLTTQQAKGAEIVRYEDDATLITSMVTGQIDLFSSTPS 192
           +   ADL GKR+G+ R T ++  L+    +G E+VR++DD+T + ++V+GQ+D   +   
Sbjct: 135 IKSLADLAGKRVGVPRGTAHEKILSAANVEGMELVRFDDDSTTLNALVSGQVDAIGTVNY 194

Query: 193 NLSEMVKQAPAKNLELKFAQKDFDLGIALNKEQPKLKEWVNNWVVTNQKNGKLNAIYKKY 252
             +++ ++ P +  E K        G+ L +  P L  W+N  +  ++++G+L AIY+K+
Sbjct: 195 IAAQLQERYPDRGFEEKTTYLQSFYGVGLRRNDPDLLHWLNTVLFVHKQSGELGAIYEKW 254

Query: 253 HGRDLPE 259
               +PE
Sbjct: 255 MKTPIPE 261