Pairwise Alignments

Query, 264 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  176 bits (447), Expect = 4e-49
 Identities = 104/265 (39%), Positives = 162/265 (61%), Gaps = 4/265 (1%)

Query: 1   MKLGTTFTRTCVALALVAGVAQAAMADQLDDIKKAGKVRVAIAMGTPLFSFADANLQPTG 60
           M +      + +  A+VAG+   A A  ++ IK AG V+V + +  P F   DAN QP G
Sbjct: 7   MNISRRIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDG 66

Query: 61  SDVDTATALAKDLGVKLEIVSITNAARVPTLQAQRADLVIADLSITPEREKVVDFSVPYA 120
            D D A  LAK+LGV++ IV +T   R+P LQ+ + DL++A L IT ER K VDFS PYA
Sbjct: 67  YDADVAKLLAKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYA 126

Query: 121 VISIIVGGPKSIKVTDYADLNGKRIGLTRATVNDTLTTQQA-KGAEIVRYEDDATLITSM 179
            ISI V G   + VT   DL GK IG+ RA+  DT TT+ A + A I R++DDA+ + ++
Sbjct: 127 GISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAVQAL 186

Query: 180 VTGQIDLFSSTPSNLSEMVKQAPAK-NLELKFAQKDFDLGIALNKEQPKLKEWVNNWVVT 238
           ++GQ++L   +    +++   AP + N +L+ +Q+    GIA+ K   ++ ++VN ++  
Sbjct: 187 LSGQVELIGVSNVVAAQIEAAAPGRFNQKLQLSQQ--VQGIAVRKGSSEMLKFVNGFLDK 244

Query: 239 NQKNGKLNAIYKKYHGRDLPERITK 263
            + +G+LNAI++K+ G  LPE +T+
Sbjct: 245 VKADGQLNAIHEKWLGSPLPEFVTE 269