Pairwise Alignments

Query, 264 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 268 a.a., amino acid ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  106 bits (265), Expect = 4e-28
 Identities = 77/254 (30%), Positives = 116/254 (45%), Gaps = 7/254 (2%)

Query: 12  VALALVAGVA--QAAMADQLDDIKKAGKVRVAIAMGTPLFSFADANLQPTGSDVDTATAL 69
           +A  LVA  A    A AD+LDDI  +G +R A+ +  P     D N +P G DVD    L
Sbjct: 6   LAFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFDVDYCNDL 65

Query: 70  AKDLGVKLEIVSITNAARVPTLQAQRADLVIADLSITPEREKVVDFSVPYAVISIIVGGP 129
           A  LGV  EIV      R+P L + R D+ +A  S T ER K V  +VPY    + V   
Sbjct: 66  ATALGVTAEIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGMTVPYFAFEMAVTAN 125

Query: 130 KSIKVTDYADLNGKRIGLTRATVNDTLTTQQAKG---AEIVRYEDDATLITSMVTGQIDL 186
           +   +  + D+ GK +G T  T        Q K     E   Y+  A +  ++  GQ+D 
Sbjct: 126 EKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEGEFRPYQTQADVFLALSQGQLDA 185

Query: 187 FSSTPSNLSEMVKQAPAKNLE-LKFAQKDFD-LGIALNKEQPKLKEWVNNWVVTNQKNGK 244
             ST +     VK      +  +  A  D D + +  N+E+     ++N +V    + G+
Sbjct: 186 TVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFLNYLNLFVNQQVRTGR 245

Query: 245 LNAIYKKYHGRDLP 258
              +Y+K+ G + P
Sbjct: 246 YAELYEKWVGGEAP 259