Pairwise Alignments

Query, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 226 a.a., amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  192 bits (489), Expect = 4e-54
 Identities = 94/219 (42%), Positives = 149/219 (68%), Gaps = 1/219 (0%)

Query: 1   MKYSLDFAPLASYWPVFINGAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIY 60
           M Y  DF P+     + + GA  TL++TA+  ++GV++G + A  +   IR  +    +Y
Sbjct: 1   MAYQFDFLPVVQNTELLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWNIRPFAAIFGVY 60

Query: 61  IEIVRNTPFLVQIFLLYFGLASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQ 120
           +E++RNTPFLVQ+F ++FGL S G+++  + AAVLAMVIN+ AY+ EIIRAG++++PRGQ
Sbjct: 61  VELIRNTPFLVQLFFIFFGLPSLGLQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQ 120

Query: 121 IEAAECLGLSKWRIGWHVMLQPSIEKVYPALTSQFLLMMQASAMASQISAEELTAIANTV 180
           +EAA  L +S++    HV+L P++ KV+PAL+SQ +++M  SA+ SQI+ EEL+  AN +
Sbjct: 121 LEAAAALAMSRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANFI 180

Query: 181 QSDTFRSLETYIVVAALYLVLSLFIK-LVTWALGEYLFR 218
           QS  FR+ ETY +   +YL ++L I+  + W     L++
Sbjct: 181 QSRNFRAFETYALTTLIYLCMALLIRQFLNWVGRRCLYK 219