Pairwise Alignments

Query, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 228 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  175 bits (443), Expect = 8e-49
 Identities = 88/228 (38%), Positives = 143/228 (62%), Gaps = 2/228 (0%)

Query: 1   MKYSLDFAPLASYWPVFINGAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIY 60
           M Y+  F PL +Y P  ++G WLT+ ++ + +  G+A+G   A        +      +Y
Sbjct: 1   MDYTFQFGPLLNYLPQIVSGLWLTIGLSFVGIFGGIALGIFCAVMSTLSSPIPRLLVRLY 60

Query: 61  IEIVRNTPFLVQIFLLYFGLASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQ 120
           +E+VRNTP LVQIF+++FGL + G+R+    +  +A+V+N   Y AEI+R G+E+  R Q
Sbjct: 61  VEVVRNTPLLVQIFVIFFGLPNIGIRLSPLTSVFIALVLNNGGYVAEIVRGGIEATHRSQ 120

Query: 121 IEAAECLGLSKWRIGWHVMLQPSIEKVYPALTSQFLLMMQASAMASQISAEELTAIANTV 180
           +EAAE LGLS ++   +V+L P++EKV+  + SQ +L+M ++++ S I  E+LT  A   
Sbjct: 121 VEAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAMIA 180

Query: 181 QSDTFRSLETYIVVAALYLVLSLFIKLVTWALGEYLF--RRRRVVRRA 226
            S+TFR++E Y+VVA +Y+VL+   + V    G  +F   RRR++ RA
Sbjct: 181 SSETFRTMEIYLVVAMVYVVLNFVFRAVLNVAGLMIFTRSRRRLLGRA 228