Pairwise Alignments

Query, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  131 bits (330), Expect = 1e-35
 Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 1/203 (0%)

Query: 15  PVFINGAWLTLKMTALAVVIGVAVGTLVAFAKRSKI-RLLSRACTIYIEIVRNTPFLVQI 73
           P  I+  ++TLK+T ++ ++ V +  LV   +     + L      Y+E+ R TP L+Q+
Sbjct: 11  PFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQL 70

Query: 74  FLLYFGLASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQIEAAECLGLSKWR 133
           F +Y+GL S G+ M +  AAVL + +N  AY +EIIRA ++SVP GQ EAAE LG+ K  
Sbjct: 71  FFIYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGKIE 130

Query: 134 IGWHVMLQPSIEKVYPALTSQFLLMMQASAMASQISAEELTAIANTVQSDTFRSLETYIV 193
              +++L  +     P L + F  +++ S++ S ++  ELT I   + + T R  E Y+ 
Sbjct: 131 SMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTRTSRPFEIYLT 190

Query: 194 VAALYLVLSLFIKLVTWALGEYL 216
           +  +YL+L   I + +W + + L
Sbjct: 191 IGLIYLILVSIISIGSWKIEKKL 213