Pairwise Alignments

Query, 468 a.a., surface antigen gene from Variovorax sp. SCN45

Subject, 397 a.a., 3-carboxymuconate cyclase from Pseudomonas stutzeri RCH2

 Score = 44.3 bits (103), Expect = 7e-09
 Identities = 77/317 (24%), Positives = 123/317 (38%), Gaps = 49/317 (15%)

Query: 187 AYVANWHSSSVSGYRIDADTGALTAIPGSPFAAGIAPYSVTVNPAGTFAYVVHRNG---- 242
           +Y  +  S  +   R D  TG +   P     +    + V  +  G   Y  + NG    
Sbjct: 42  SYTHDSDSPGILRLRFDPATGQIDPKPVQTLTSDNPSWLVLDDKRGRL-YATNENGPAHA 100

Query: 243 ----LISAYRIDATTGALTAVTGSPFATGAVPVSVTVNPAGTFAYVANSGSNN------- 291
                +SA+++D+++     + G   + G  P   +++  G + +++N GS         
Sbjct: 101 DPVGRVSAWQLDSSSEH--QLIGQNISLGDEPTHASLSHDGRYLFISNYGSRPNPGGSLA 158

Query: 292 VSAYRIDAATGALTAITGSPFLAGNQP--------HSITVNPAGTFAYVANW-SNAISVY 342
           V     D     +T I      +G  P        HS   +P G    V++  ++ + VY
Sbjct: 159 VMPLAEDGHPLPVTQILAHQS-SGVHPERQRSAHVHSAVPSPDGKRLLVSDLGADRVFVY 217

Query: 343 RIDADTGALTAIADSPFFTIGLP-----NSIAVNPAGTFAYLANQFGYILAYRIDAATGA 397
           R D         AD P  +I LP       +  +P G  AYLA +    +A   D   G 
Sbjct: 218 RYDPQNAERPLQADEPA-SIELPPGSGPRHLVFHPNGKHAYLALELSAQVA-SFDYTNGT 275

Query: 398 LAAITGSPLL----AGNQ----PNAITVNPTGNFAYATDQAD-NTVLAYRIDAATGALTP 448
           L   T   LL    AGN     P AI  +  G F Y +D+ D N ++ + I+ A G L  
Sbjct: 276 L---TRRQLLDLKDAGNDVRHSPGAIHSSADGRFLYVSDRGDYNHIIVFAIE-ADGTLRE 331

Query: 449 LTGSPFSTGREPLSITV 465
           +     S GREP    +
Sbjct: 332 IQRRS-SEGREPREFAI 347



 Score = 37.7 bits (86), Expect = 7e-07
 Identities = 51/180 (28%), Positives = 72/180 (40%), Gaps = 30/180 (16%)

Query: 34  NASAP---SESAPSEPPPGDTPTYKVTGSLSGLATGESVTLLANGQPVVMSQNGTFQVAS 90
           NA  P    E A  E PPG  P + V                 NG+   ++   + QVAS
Sbjct: 223 NAERPLQADEPASIELPPGSGPRHLV--------------FHPNGKHAYLALELSAQVAS 268

Query: 91  GLAAGATYAVTVGTRPRTQACVVTDGTGVIGASNVSNVSVACAIRPQFAYVANKSD-NNI 149
                  +  T GT  R Q   + D    +  S  +  S A     +F YV+++ D N+I
Sbjct: 269 -------FDYTNGTLTRRQLLDLKDAGNDVRHSPGAIHSSADG---RFLYVSDRGDYNHI 318

Query: 150 SAYRIDVATGALTAIPGSPFATGTSPASVAVNAAGTFAYVANWHSSSVSGYRIDADTGAL 209
             + I+ A G L  I     + G  P   A+ A G F  +AN  S  +   R D D+G L
Sbjct: 319 IVFAIE-ADGTLREIQRRS-SEGREPREFAITADGRFMLIANQLSDELVVIRRDPDSGQL 376



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 11/140 (7%)

Query: 172 GTSPASVAVNAAGTFAYVANWHSSSVSGYRIDADTGALTA-----IPGSPFAAGIAPYSV 226
           G+ P  +  +  G  AY+A   S+ V+ +  D   G LT      +  +      +P ++
Sbjct: 241 GSGPRHLVFHPNGKHAYLALELSAQVASF--DYTNGTLTRRQLLDLKDAGNDVRHSPGAI 298

Query: 227 TVNPAGTFAYVVHRNGL--ISAYRIDATTGALTAVTGSPFATGAVPVSVTVNPAGTFAYV 284
             +  G F YV  R     I  + I+A  G L  +     + G  P    +   G F  +
Sbjct: 299 HSSADGRFLYVSDRGDYNHIIVFAIEAD-GTLREIQRRS-SEGREPREFAITADGRFMLI 356

Query: 285 ANSGSNNVSAYRIDAATGAL 304
           AN  S+ +   R D  +G L
Sbjct: 357 ANQLSDELVVIRRDPDSGQL 376