Pairwise Alignments

Query, 468 a.a., surface antigen gene from Variovorax sp. SCN45

Subject, 324 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 20/162 (12%)

Query: 283 YVANSGSNNVSAYRIDAATGALTAITGSPFLAGNQPHSITVNPAGTFAYVANWSNAISVY 342
           +V+N   NN++   +D+ +  + A     F AGN+P  IT++P G   YV   S+  +V 
Sbjct: 25  FVSNERGNNITV--LDSESWEVIAT----FPAGNRPRGITISPDGKELYVCA-SDDDTVR 77

Query: 343 RIDADT-GALTAIADSPFFTIGLPNSIAVNPAGTFAYLANQFGYILAYRIDAATGALAAI 401
             D +T   L  +   P      P   A++P+G   Y+AN+   ++   +D  T  + A 
Sbjct: 78  VFDPETYKELHTLPSGPD-----PELFALDPSGNPLYIANEDDNLVTV-VDVKTRQVLA- 130

Query: 402 TGSPLLAGNQPNAITVNPTGNFAYATDQADNTVLAYRIDAAT 443
               +  G +P  + V+P       T +  N  +A+ IDA+T
Sbjct: 131 ---EVPVGVEPEGVAVSPDAKTIINTSETTN--MAHFIDAST 167



 Score = 35.4 bits (80), Expect = 3e-06
 Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 22/187 (11%)

Query: 264 FATGAVPVSVTVNPAGTFAYVANSGSNNVSAYRIDAATGALTAITGSPFLAGNQPHSITV 323
           F  G  P  +T++P G   YV  S  + V  +  +      T        +G  P    +
Sbjct: 48  FPAGNRPRGITISPDGKELYVCASDDDTVRVFDPETYKELHT------LPSGPDPELFAL 101

Query: 324 NPAGTFAYVANW-SNAISVYRIDADTGALTAIADSPFFTIGL-PNSIAVNP-AGTFAYLA 380
           +P+G   Y+AN   N ++V     D      +A+ P   +G+ P  +AV+P A T    +
Sbjct: 102 DPSGNPLYIANEDDNLVTV----VDVKTRQVLAEVP---VGVEPEGVAVSPDAKTIINTS 154

Query: 381 NQFGYILAYRIDAATGALAAITGSPLLAGNQPNAITVNPTGNFAYATDQADNTVLAYRID 440
                 +A+ IDA+T  +       +L   +P        G   Y + +   TV    + 
Sbjct: 155 ETTN--MAHFIDASTYKIV----HNVLVDQRPRYAEFTADGKKLYVSAEIGGTVSVIDVS 208

Query: 441 AATGALT 447
           AA   +T
Sbjct: 209 AAEPKIT 215



 Score = 30.8 bits (68), Expect = 7e-05
 Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 20/136 (14%)

Query: 217 FAAGIAPYSVTVNPAGTFAYVVHRNGLISAYRIDATTGALTAVTGSPFAT---GAVPVSV 273
           F AG  P  +T++P G   YV   +        D T       T     T   G  P   
Sbjct: 48  FPAGNRPRGITISPDGKELYVCASD--------DDTVRVFDPETYKELHTLPSGPDPELF 99

Query: 274 TVNPAGTFAYVANSGSNNVSAYRIDAATGALTAITGSPFLAGNQPHSITVNP-AGTFAYV 332
            ++P+G   Y+AN   N V+   +D  T  + A        G +P  + V+P A T    
Sbjct: 100 ALDPSGNPLYIANEDDNLVTV--VDVKTRQVLA----EVPVGVEPEGVAVSPDAKTIINT 153

Query: 333 ANWSNAISVYRIDADT 348
           +  +N    + IDA T
Sbjct: 154 SETTN--MAHFIDAST 167