Pairwise Alignments

Query, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  105 bits (263), Expect = 1e-27
 Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 3/191 (1%)

Query: 308 LWKLARQHLFLVALSVGIAILIGVPIAILVFPHVRLRAVVLG--FASLLQTVPSLALLAV 365
           L+ L   HL  V ++   A ++ V +AI+V        + L     ++ QT P +A+LA+
Sbjct: 47  LFWLTVLHLRTVFVATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLAL 106

Query: 366 LISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLRLVLL 425
            + + G  G  P LIAL LY LLPI  N +TGL  +P  +  A    GMT  Q L  + L
Sbjct: 107 AVPIYG-FGEKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIEL 165

Query: 426 PLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDRELLLAGALPAAALA 485
           PLALP +L G+R +  I++ TATI + + A   GE I+ GL  N+   +L G L   ALA
Sbjct: 166 PLALPVILTGIRLSVVISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALA 225

Query: 486 LVSEGVFELIE 496
           ++     + +E
Sbjct: 226 VLIHDALQGLE 236