Pairwise Alignments

Query, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

Subject, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 3e-38
 Identities = 86/207 (41%), Positives = 114/207 (55%), Gaps = 16/207 (7%)

Query: 309 WKLARQHLFLVALSVGIAILIGVPIAILVFPHVRLRAVVLGFASLLQTVPSLALLAVLIS 368
           W  A +H+ L   S+  A ++G+P+ IL     RLRA VL   + +QT+PS+AL  +LI+
Sbjct: 184 WTEAGRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIA 243

Query: 369 MLG---------------AIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALG 413
            LG                IGA PA +AL LYSLLP++ NTV GLA VP+    A   +G
Sbjct: 244 PLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIG 303

Query: 414 MTPPQSLRLVLLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDREL 473
           MT  Q L  +  PLA P +L G+R      IG ATIAA IG GGFG  +  G+     +L
Sbjct: 304 MTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDL 363

Query: 474 LLAGALPAAALALVSEGVFE-LIEFLM 499
           +L GA+P   LA  +  V + LIE  M
Sbjct: 364 VLLGAIPTVVLAFTAAIVLDALIEMTM 390