Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  155 bits (392), Expect = 2e-42
 Identities = 100/293 (34%), Positives = 150/293 (51%), Gaps = 20/293 (6%)

Query: 8   GIAYGMLLFVLAVGLAVTLGLMNFINLAHGAFAMAGGYLTVFAMQKLGLPF--------L 59
           G++ G +L + A+GLA+T G+M  IN+AHG   M G Y T      +   F         
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 60  ACLPLAFIVVALAGALLERTLYRPMYGKPHLDQVLFSIGLAFMAVAAIDYFVGSSQQNVQ 119
             LPLAF+V    G  LER + R +YG+P L+ +L + G++ +    +    G + + V 
Sbjct: 308 IALPLAFLVTGAVGLALERGVIRFLYGRP-LETLLATWGISLILQQTVRTIFGPTNREVG 366

Query: 120 LPEWLRGRTEIGDGAFMLGMGHYRLFIIGVCAVLTVVLQLILSKTRFGSRLRAAVDDPRV 179
            P W+ G  E+G     L +   RL+II     +   L  +L KT  G ++RA   + R+
Sbjct: 367 NPSWMSGAFELGG----LAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRM 422

Query: 180 AAGLGINVNIVFLLTFAVGSGLAGLGGALGAEILGLDPTFPLKYMIYFLIVVSVGGTSSI 239
           A+ +GI    V  LTFA+GSG+AG+ G   ++I  + P     Y+I   +VV  GG  ++
Sbjct: 423 ASSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNL 482

Query: 240 TGPLAAALLLGIADVAGKYFIPKMGA----FTVYLLMILILMWRPQGLFTRKG 288
            G L  A  LGI +   K+  P  GA      V +L+IL +  RP+GLF  KG
Sbjct: 483 WGTLVGAFSLGILN---KFLEPYAGAVLGKILVLVLIILFIQKRPRGLFALKG 532