Pairwise Alignments

Query, 681 a.a., DNA primase DnaG from Variovorax sp. SCN45

Subject, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  422 bits (1084), Expect = e-122
 Identities = 234/552 (42%), Positives = 322/552 (58%), Gaps = 35/552 (6%)

Query: 9   IPASFIQELIARADVVEIVGRYVPLKKAGANFMGLCPFHGEKSPSFSVSPTKQFYHCFGC 68
           IP SFI +L+ R D+V++V   + +KKAG N+   CPFH EK+PSFSVSP KQFY+CFGC
Sbjct: 5   IPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGC 64

Query: 69  GVHGNAIGFLMEHAGMGFVEAVHDLADQYGLQVPEDDASPAERARAASQRQKQATLTDVL 128
           G  GNA+GF+M+H  + F +AV +LA   G+++P +++    + R  +     + L  +L
Sbjct: 65  GAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTD----SPLYPLL 120

Query: 129 EKAGDAYRKHLRQAPG---AIEYLKGRGVSGEVAKQFGIGYAPAGWRALASVFPD--YDD 183
             A D YR+ L+  P    A++YLKGRG++GE+A+ FG+G+AP GW  L           
Sbjct: 121 TAAADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180

Query: 184 PLLTESGLVIVNNEEGKLSDEEAKRYDRFRDRVMFPIRNVKGECIGFGGRVLGDEKPKYL 243
             + ++GL+I N E GK       RYDRFRDRVMFPIR+ +G  I FGGRVLGD+KPKYL
Sbjct: 181 RAMIDAGLLIENAETGK-------RYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYL 233

Query: 244 NSPETPVFSKGRELYGLYEARAAFRDRGYALVTEGYMDVVALAQLGFPNAVATLGTACTS 303
           NSPETPVF KG+ELYGLYEAR   R+    +V EGYMDV+ALAQ G  NAVATLGTA + 
Sbjct: 234 NSPETPVFHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSE 293

Query: 304 EHVQKLFRFTESVVFSFDGDAAGRRAARKALDGALPYATDVRSIKFLFLPAEHDPDSFIR 363
           EH+++LFR   +V+F FDGD AGR AA +AL+  LP   D R  +FLFLP   DPD+ +R
Sbjct: 294 EHMKRLFRVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVR 353

Query: 364 EHGAEAF-ARFVTEATPLSRFMLEAAREGCDLTTAEGRAHMTSNVRPLWSAMPDGALKRQ 422
             G +AF AR    A PL+ +  +   E  D  + EG+AHM +   PL   +P   L+  
Sbjct: 354 SEGTDAFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTL 413

Query: 423 LLSEIATLVQLDAPALSELWASTPGPRKAGGGALAAQRHNEPPMYTGGDGDDYYPDMPPP 482
           +   ++ +  L++ A+++L  S P                 PP Y  G   D  PD    
Sbjct: 414 MRQRLSEITGLNSEAVNQLVHSAP--------------QEAPPAYDPGIDYDAMPDF--- 456

Query: 483 QDYEPPRYESDSKPKFQPQRKFTKGKRWGGKFEEPIEPLRGRGAPPSRPDVAVRLLLSNM 542
            DY  P+ +   + ++ P++  + GK+W  K  +     RG    P  P V   +    +
Sbjct: 457 ADYHQPQQDYAPQQEWTPKKTGSGGKKWDKKPWDK-NGKRGDRDQPRAPRVPAAVEPPTL 515

Query: 543 AQWEALSHELHL 554
           A    L H   L
Sbjct: 516 AALRTLLHHPQL 527