Pairwise Alignments

Query, 308 a.a., Deacetylases, including yeast histone deacetylase and acetoin utilization protein from Variovorax sp. SCN45

Subject, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (479), Expect = 9e-53
 Identities = 107/294 (36%), Positives = 158/294 (53%), Gaps = 11/294 (3%)

Query: 11  LPLPEGHRFPMSRYAMLRDRLLEQLPAVRMDVA------PRAGD-DELALAHTPEWIAAV 63
           L LP GHR+P+++Y +L + ++ Q        A      P A +   +   H P+++ A+
Sbjct: 13  LDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRLHDPDYVQAL 72

Query: 64  SEGSVSPQAMREIGFPWSEAMVERSRRSAGATIAACRVAFAEGVSANMAGGTHHAYAGKG 123
            EG++S   MR IGFPWS+ ++ER+  S G T      A   GV+ +++GG HHA+A  G
Sbjct: 73  LEGTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQALQSGVAIHLSGGYHHAHADFG 132

Query: 124 SGFCVFNDAAVAARLMQAEHARDGRRLPVAVIDLDVHQGNGTASIFQDDPSVFTLSLHGQ 183
           SGFC+FND A+AA    +  + D     V +ID DVH G+GTA++  +   + TLS H  
Sbjct: 133 SGFCLFNDLAIAAHFALSLPSVD----KVLIIDSDVHHGDGTATLCAERDEIITLSFHCD 188

Query: 184 KNFPFRKEASDLDVELPDGCGDADYLAALEHALEELDRRFAPALVIYLAGADPFERDRLG 243
           KNFP RK AS +DV   +  GD ++L+     +E       P L++Y AG D    D LG
Sbjct: 189 KNFPARKPASSMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELG 248

Query: 244 RLKLSFDGLEARDRRVFDWAWQRRLPMAFAMAGGYASDIAETVQVQVGTFKVAL 297
            L +S   +  RDR +   A Q  +P+A  + GGY  D    V + +   K AL
Sbjct: 249 YLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGYREDHTALVPLHLELLKAAL 302