Pairwise Alignments

Query, 455 a.a., DNA recombination protein RmuC from Variovorax sp. SCN45

Subject, 537 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 94/412 (22%), Positives = 169/412 (41%), Gaps = 60/412 (14%)

Query: 52  ERELRREIADSSRG-ARQETTQAFATFQRSLVQQGAEATRTQNAQLDAFSLQLASLQKTL 110
           E+E+R+   D+    A+Q+        Q  L QQ  E       + +A + ++ SL++ L
Sbjct: 46  EQEMRQVNEDAELSLAQQQILVDDKDSQLRLCQQRLEQKIEHLGKAEALAERVPSLEQQL 105

Query: 111 ADTLSTQLQ---GLSESNARR-------------LSEVRATMESQLVQLQQT--NAAK-- 150
           +D+   QL+    LS+SNA +             L E  AT+ES  V+LQ    N A   
Sbjct: 106 SDSHRRQLELQLALSKSNAMQQTIQAKADAQQESLREKIATLESAEVRLQTQFENLANRI 165

Query: 151 LDEMRKTVDEKLQSTLETRLGESFKQVADRLEQVHKGLGEMQT----------------- 193
            +E  +    +  + LE  LG   +Q+    +Q+ +     Q+                 
Sbjct: 166 FEERSENFKHQNANQLEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRDLNL 225

Query: 194 -LAVGVGSLQRVLT-NVKTRGVFGEVQLEALLEQ--VLTPDQYAKQIETKPRSGQRV--D 247
            ++    +L + L  + K +G +GEV L+ +L++  +    +Y  Q + K  SG+R   D
Sbjct: 226 KMSQDAINLTKALKGDNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPD 285

Query: 248 FAIRFPGRGEEGAPVWLPIDAKFPRDDYERLIDAHERADAAGAELAAKALEARIRTEAKS 307
             +  P   +      + IDAK     YER  ++    D    E A       IR   K 
Sbjct: 286 VIVHLPENKD------VVIDAKMSLISYERYFNSE---DPLVREQAINEHVLSIRNHIKG 336

Query: 308 IADNYLAAPH---TTDFAILFLPVESLYAEVLRRPGLMDAIQRQHRVTLAGPTTLLAMLN 364
           ++       H   + D+ ++F+P+E  +   L     +     +  + L  PT LL  L 
Sbjct: 337 LSQKDYQRLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALR 396

Query: 365 SLHMGFRTLALEQQASEVWKVLGAVKTEFERYGDWVGRIKEQVAKASDTLDK 416
           +++  +R     Q A  + K  G +  +   Y + +    E++ +A D  +K
Sbjct: 397 TINNIWRYEYQNQHAQTIAKQAGRIYDKLCGYLEDM----EKLGRALDNAEK 444