Pairwise Alignments

Query, 387 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 383 a.a., MFS transporter from Methanococcus maripaludis S2

 Score = 83.6 bits (205), Expect = 9e-21
 Identities = 86/367 (23%), Positives = 149/367 (40%), Gaps = 28/367 (7%)

Query: 14  VCLHATMAGMRLATPLLAL---QQGYSAAAVGVLISLFALTQVFLALPAGRFADRHGFKR 70
           + +  TM G+ L +PLLA+     G S   +G++   FAL +    LPAG  +D +G K 
Sbjct: 13  ITIFVTMLGIGLISPLLAIFAKSYGLSNFQIGLIFGSFALVRTIFQLPAGTLSDSYGKK- 71

Query: 71  PLWLSVIAAVVGAGLVVVFPVFPVMCLSALLTGGATGATVIALQRHVGRSAHDPTQLKRV 130
              + ++   +  G+  +F  F     S L+    TG     +    G      +   ++
Sbjct: 72  ---VFLVGGTLLYGVTTLFYGFASGFASILIVRTFTGVFSAFVNPVAGSYIAQTSPKSKL 128

Query: 131 FSWLAIAPAAANF---VGPFLAGMLIDHAGRAPADMLAFRVCFAVMAALPLVCWLLARGA 187
             ++ +  +A +    VGP L G+L        ADM  F V F V   L ++  ++A   
Sbjct: 129 GEYMGLFNSAISLGFGVGPLLGGLL--------ADMYGFMVPFYVGGLLGIIASIIAYFK 180

Query: 188 DEPPLAPPLAGATPTRAW------DLLREPMFRRLLFVNWLQSSSWDVHAFVLPVLGHDR 241
            E     P        +W      + L+   F     +N   + S       L +  +D 
Sbjct: 181 LEDT---PKTQEKQKLSWKNLFSLEFLKMRNFSAAFIINIALTISRGAILAYLAIYAYDY 237

Query: 242 GISASVIGSILGAFAVAAAVIRVVLPVIASRASERSVILSSTIVTALVFAVYPLLEAAWA 301
           G+SA  IG +L A  +  AV + +   I      R +IL   I+  L   +  +  +   
Sbjct: 238 GVSAFKIGVMLAAMNLVLAVTQKMFGRIFDEKGNR-IILHGIIIGNLGMFILAMSTSFTT 296

Query: 302 MGVCSVILGFALGAVQPMVMSMLHQITPHTRHGEALGLRLMTINASSVAMPMLFGSLGAL 361
           M +  +I         P + S+  +  P  R GEA+GL   +IN       +L G +  +
Sbjct: 297 MFISLIISSIGASMSTPGINSIAIRDIPDKRQGEAMGLYTASINVGIFFGAVLLGYISDI 356

Query: 362 IGIAGVF 368
           +GI+ ++
Sbjct: 357 VGISNMY 363



 Score = 47.0 bits (110), Expect = 9e-10
 Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 1/145 (0%)

Query: 233 VLPVLGHDRGISASVIGSILGAFAVAAAVIRVVLPVIASRASERSVILSSTIVTALVFAV 292
           +L +     G+S   IG I G+FA+   + ++    ++    ++  ++  T++  +    
Sbjct: 28  LLAIFAKSYGLSNFQIGLIFGSFALVRTIFQLPAGTLSDSYGKKVFLVGGTLLYGVTTLF 87

Query: 293 YPLLEAAWAMGVCSVILGFALGAVQPMVMSMLHQITPHTRHGEALGLRLMTINASSVAMP 352
           Y       ++ +     G     V P+  S + Q +P ++ GE +GL    I+      P
Sbjct: 88  YGFASGFASILIVRTFTGVFSAFVNPVAGSYIAQTSPKSKLGEYMGLFNSAISLGFGVGP 147

Query: 353 MLFGSLGALIGIAGVFWVVGGVLAL 377
           +L G L  + G    F+ VGG+L +
Sbjct: 148 LLGGLLADMYGFMVPFY-VGGLLGI 171