Pairwise Alignments

Query, 295 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 308 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score =  221 bits (563), Expect = 2e-62
 Identities = 134/301 (44%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 3   SAAPARNAGW-LRAMPGVFVLIWSTGFIVARYGMPYAPPLKFLAVRYALSLVCFGAWVAL 61
           +AAP+ +A   LR  P VFVL+WSTGFI AR  +P+A PL  L +R+A ++   G    +
Sbjct: 2   TAAPSPSASLSLRVAPAVFVLLWSTGFIGARLVLPHAEPLTVLCLRFAATVALLGPLCLV 61

Query: 62  ARVAWPKQRAQWGHLAVTGVLMQAGYLGGVWAAVHEGMGAGLVALLVGIQPVLTAVWLS- 120
            +  WP    Q  H+AV G+L+ A YLGGV+AA+  GM AGL AL+VGIQP+LTA     
Sbjct: 62  LKARWPTSPHQLLHVAVAGILVHALYLGGVFAAISLGMPAGLTALVVGIQPLLTAALAGP 121

Query: 121 FNGGRISKRQWGGLALGFAGLVLVVSRKLGQGAEV-----SALTMGLALMALLSITAGTL 175
             G + + RQ  GL LG AG+  V+  KL   A        A  M  AL AL  IT GTL
Sbjct: 122 VLGEKTTARQGLGLVLGLAGVAAVLGDKLAPQAGTLFDGFGAAAMICALAALCGITFGTL 181

Query: 176 YQKRFVAPCDVRSASAVQMAAALLVTLPFA-ALEPQHIEWNLQSGGAMAWSVLALSLGGS 234
           YQKRF    D+ S S +Q   + +V LPFA   E   ++W  +    +AW V+ LS+G  
Sbjct: 182 YQKRFCQGVDLTSGSLIQFIVSGVVLLPFAYTFETMRVDWTAEFIFGLAWLVVGLSVGAV 241

Query: 235 SLLYMLIQRGTATAVTSLLYLVPPCTAVMAWLLFSEPITLVTVLGIALTAVGVSLVVRGE 294
           +LL  +I+ G A  V SL YLVPP TA+MAW LF E +  + + G+A+T  GV+LVV   
Sbjct: 242 TLLLAMIRHGAAGRVASLFYLVPPTTALMAWGLFDERLGPLALAGMAVTVAGVALVVAPR 301

Query: 295 R 295
           R
Sbjct: 302 R 302