Pairwise Alignments

Query, 303 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

Subject, 299 a.a., peptidase, M23/M37 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.9 bits (180), Expect = 4e-18
 Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 4/121 (3%)

Query: 183 DLGWIWPASGSLIAGFDEAK--NKGYDISGKAGDPVLAAADGRVVYAGAGLRGYGNLIIL 240
           D GW+    G     F+  +  +KG D +G+ G  V+A A G V +AG  + GYG L+ +
Sbjct: 175 DKGWLSSPYGLRNDPFNGRRTMHKGIDFTGREGAKVVATAAGVVTWAG-NMFGYGELVEI 233

Query: 241 KHNNTYLTAYAHNQTLLVKEDQSVQKGQKIAEMGSSD-ADRVKLHFEIRRQGKPVDPSRY 299
            H N   T Y HN+ L V     V KG+ IA MGS+  +    +H+E+ R G+ +DP ++
Sbjct: 234 DHGNGLRTRYGHNKALSVAVGDVVAKGETIASMGSTGRSTGAHVHYEVLRGGQQIDPQKF 293

Query: 300 L 300
           +
Sbjct: 294 V 294