Pairwise Alignments

Query, 233 a.a., Integral membrane protein, interacts with FtsH from Variovorax sp. SCN45

Subject, 250 a.a., Protein of unknown function UPF0005 (NCBI) from Rhodospirillum rubrum S1H

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 56  SLTGGLGLIVFLGGAFGFMFAIEKTKNSAAGVPVLLGFTFFMGLMLSRLIAMVLGFKNGS 115
           ++ G + +   LG  F  MFA +K  ++AA       F    G+ LS L+ +  G     
Sbjct: 74  NMLGMIAVFAPLGLLFLAMFAAQKM-SAAASQMFYWAFVALQGVSLSTLLLVYTG----- 127

Query: 116 ELIMTAFGGTAGVFFVMASLATIIKRDLSGMGKFLFVGAMVLMFGAIINVFVGSSTGMLV 175
           E I+  F  TAG F  ++      KRDL+G GKFLF+G + ++  A++N+F+GSS    V
Sbjct: 128 ESIVRVFFITAGTFAALSLYGYTTKRDLAGFGKFLFMGLIGMLLAAVVNIFLGSSMLQFV 187

Query: 176 ISVAAIGIFSAYMLYDLKQIMD--------GGETNY-ITATLALYLDLFNVFQSLLALLG 226
           +S   + +FS  + YD + I +          ET   + + LALYL+  N+ Q LL  LG
Sbjct: 188 VSAVGVLVFSGLIAYDTQAIKERYYDGLGRDSETKMAVFSALALYLNFINLLQFLLYFLG 247