Pairwise Alignments

Query, 737 a.a., TonB-dependent hemin, ferrichrome receptor from Variovorax sp. SCN45

Subject, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (435), Expect = 7e-47
 Identities = 184/733 (25%), Positives = 316/733 (43%), Gaps = 96/733 (13%)

Query: 40  EVVVSGSRSEQSRDDLPVSTEVISRDDIESKQITDIRDAVRDLPNVSVKRAPARFGLAQG 99
           EVVV+ +R EQ   ++  S  V+  + +E +  T++ DA+   P VSV           G
Sbjct: 30  EVVVTANRIEQPLSEVAGSVAVLEGETLEKQGKTELYDALNQEPGVSVT----------G 79

Query: 100 NTGRDGNAGFNIRGLDGNRVLLLTDGIRTPRSYVFSA--NAFGRDYFDISLVERIEIIKG 157
             GR  N    IRG+ GNR+ ++ DGI++   Y  +   + +GR+ F +S V++I+++KG
Sbjct: 80  GAGRPQN--ITIRGMTGNRIAIVRDGIQSADGYGAADINDKYGRNTFSLSNVKQIQVVKG 137

Query: 158 PASALYGSDGLAGLVNFITRDPSSYLRDGKTFGGSANIGYSGDDNGTHGGVTLAGKANDT 217
            +S LYGS  + G+V   ++ P  YL   + +   A + YSG  N   G   LA +  D 
Sbjct: 138 ASSTLYGSGAIGGVVIIESKAPEDYLYH-RDYYVDAALTYSGISNRYQGNHALAMRHGDG 196

Query: 218 MQWLISANMGRASALENMGT---NNAANADRTTPNPQRDRNKALLAKVILT---PNADQR 271
            + L++ +  +     N      N   +      +     N AL  K  L      A +R
Sbjct: 197 -EALLTIDYWQGEETRNFNQDLYNREVDGYNLGFSHHYWLNDALRLKTHLEYFDDYAKRR 255

Query: 272 HGFTFEHIDKTSRYDLLSGLS-KPPYASTSVIGLNAKSDLQ-------------RDRFTY 317
            G +   I K  ++DL+S    +      + +G +  ++L               +  T 
Sbjct: 256 EGTS--SIQKDDKWDLVSFYEYQRSQTRLASVGADYTANLSWMDTLEGKFYWRSTENITQ 313

Query: 318 DGRLRIDSAVADSLLAVVSYQKAKSREFIYEDRYTAADRTRDVTYDEATWQFGLQADKTV 377
             RL  +     S   ++SY++                  RD  +++      L A K  
Sbjct: 314 TNRLMANDR---SGAGILSYRR----------------ELRDEGFNDEALGATLNAQKEW 354

Query: 378 RMGDWAQKITYGF-----DYTRT-NVENLQTGLVPPAGETYPLKRFPDTRETSSAFYVQD 431
           + G+W  +  YG      DY R  ++  +++       +    + F   RE     Y QD
Sbjct: 355 QQGEWLHQFAYGMSVDGHDYQRPKSIRRMESS----GDDLQADEPFAPAREYRFGVYGQD 410

Query: 432 EFIHDRWSITPGIRFDRFSLDAKQAG--FGAQAVSLSGSAVSPKLGVLFRATPQWSIYGN 489
             +   W++  G+RFD   L  K      G + V++  S  SP   + ++  P+W+ Y +
Sbjct: 411 NLLLGDWTLAAGLRFDAQKLSPKNTDRIHGYKVVTMGSSEWSPSASISYQWHPEWNTYLS 470

Query: 490 YASGFKAPN---AFQVNNFFENVISGYKTIPNPNLKPEKSQNIELGMRGRTGVLSYDVAA 546
           Y  GF+AP+   A+  ++     ++ +   PN  L+ E S + ELG +   G   + VA 
Sbjct: 471 YNHGFRAPSYDKAYGASDHSFVPLTPFIIKPNNKLRAETSDSFELGSKYDNGQTQFYVAV 530

Query: 547 FTGDYKDLIENDRQVGGVFGSRTNPATFQSVNIGRARISGFEIKGELDFTDNGNGFSVPF 606
           F   + + I+  +QVG  + + T     Q  NI   +  G E+       D    +SV  
Sbjct: 531 FYSIFDNFID-VKQVG--YDNATGSVIQQYQNIAGVKTYGAEMSVMHRLDDR---WSVEN 584

Query: 607 AYGQTRGRDRTNNRPLNSIDPSKAAIGIKYQAPVWMVRLDAVNHSRKKWSDI---DPTEV 663
             G   G+D   N+ + ++ P + ++ + YQ   W    DA  +SR  W+      PT  
Sbjct: 585 KLGYVDGKD-GENQYVRTLTPLEGSVQLNYQRERW----DA--YSRLNWASAMSRVPT-C 636

Query: 664 TTGTQFQTPAATT-----FDVSAQWRIRKDLRLNASVTNLTNKRYWMWSDVRGLTSTSTI 718
           TT    +T  ATT     +D+   ++    L  + +V NL ++ Y  + DV G+T + T+
Sbjct: 637 TTEQGKETECATTTGWVSWDIGLNYQWNAQLSASFNVVNLLDREYTRYQDVAGVTPSDTL 696

Query: 719 RDAYTQPGRSFNV 731
               T+PGR F V
Sbjct: 697 YS--TEPGRYFTV 707