Pairwise Alignments

Query, 468 a.a., Replicative DNA helicase (DnaB) (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 464 a.a., primary replicative DNA helicase from Pseudomonas syringae pv. syringae B728a

 Score =  477 bits (1228), Expect = e-139
 Identities = 239/461 (51%), Positives = 327/461 (70%), Gaps = 7/461 (1%)

Query: 10  NDPSA----DRQIAQLRIPPHSIEAESSVLGGLLLDNGAWDRMGDLLVDGDFYRHEHKLI 65
           ND SA    D Q A L++PPHSIEAE +VLGGL+LDN AW+R+ D + DGDFYRH+H+LI
Sbjct: 2   NDISAPEQYDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLI 61

Query: 66  YAAIGGLINASKPADVITVYEQLQNLGKADEIGGLVYLNSLAQYVPSASNIRRYAEIVRE 125
           + AI  L + + P DV+T+ EQL   G+  ++GGL YL+ LA+  PS +NI+ YA+IVR 
Sbjct: 62  FRAIARLADQNSPIDVVTLAEQLDKEGQTSQVGGLGYLSELAKNTPSVANIKAYAQIVRA 121

Query: 126 RSILRKLVSAADEIATQAFNPQGKQVDKILDEAEQKIFNIGEEGTRMKQGFQ-SMDALVV 184
           R+ LR+L+  + EIA  AFNP+G+  ++ILDEAE++IF I E   R K G   S++ L+ 
Sbjct: 122 RATLRQLIGISTEIADSAFNPEGRTAEEILDEAERQIFQIAE--ARPKTGGPVSVNDLLT 179

Query: 185 ELLDRVTEMAENPNDITGIRTGFHDFDKMTSGLQPGDMIVLAARPSMGKTSLAINIAEHV 244
           + +DR+  +  + N ITG+ TG+ D D+ TSGLQP D+I++A RPSMGKT+ A+N+ E+ 
Sbjct: 180 KAIDRIDTLFNSDNAITGLSTGYTDLDEKTSGLQPSDLIIVAGRPSMGKTTFAMNLVENA 239

Query: 245 ALEEGLPVAVFSMEMGASQLAVRIVGSIGRIDQGHLRTGKLSDEEWPRLTEAIEKLRTVS 304
            L     V V+S+EM    L +R++ S+GRIDQ  +R G+L D++WPRLT A+  L    
Sbjct: 240 VLRSDKVVLVYSLEMPGESLIMRMLSSLGRIDQTKVRAGQLDDDDWPRLTSAVNLLNDRK 299

Query: 305 LHIDETPGLSTSELRANARRLARQYGRLGLIVVDYLQLMSTSSSGDENRATAVGEISRGL 364
           L ID+T G+S SE+RA  RR+ R++G + +I++DYLQLM    S  +NR   + EISR L
Sbjct: 300 LFIDDTAGISPSEMRARTRRIVREHGDIAMIMIDYLQLMQIPGSSGDNRTNEISEISRSL 359

Query: 365 KMLAKELKCPVIALSQLSRGVESRTDKRPMMSDLRESGAIEQDADIIMFIYRDDYYDKNS 424
           K LAKE  CPVIALSQL+R +E R +KRP+ SDLRESGAIEQDAD+IMF+YRD+ Y   +
Sbjct: 360 KALAKEFNCPVIALSQLNRSLEQRPNKRPINSDLRESGAIEQDADVIMFVYRDEVYHPET 419

Query: 425 KEPGVAEVIISKHRNGPTGTVKLAFLKPITKFENLASYSHN 465
           +  G+AE+II K RNGP GT +LAF+   T+FENLA  S+N
Sbjct: 420 EHKGIAEIIIGKQRNGPIGTTRLAFIGKYTRFENLAPGSYN 460