Pairwise Alignments

Query, 468 a.a., Replicative DNA helicase (DnaB) (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 468 a.a., replicative DNA helicase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  449 bits (1155), Expect = e-131
 Identities = 222/468 (47%), Positives = 322/468 (68%), Gaps = 3/468 (0%)

Query: 1   MSAVFSYADNDPSADRQIAQLRIPPHSIEAESSVLGGLLLDNGAWDRMGDLLVDGDFYRH 60
           MS   ++       D Q+  L++PPHSIEAE SVLGGL+LD  AWD++ + +V  DFY  
Sbjct: 1   MSQQGAFKPKSKPRDLQVDSLKLPPHSIEAEQSVLGGLMLDADAWDKVAETVVKEDFYSR 60

Query: 61  EHKLIYAAIGGLINASKPADVITVYEQLQNLGKADEIGGLVYLNSLAQYVPSASNIRRYA 120
            H++I+AA+  L+   +P D+ITV EQL+   + +E GG  YL  +A+  PSA NI  YA
Sbjct: 61  SHRMIFAAMHRLVETGQPIDLITVSEQLELENQLEEAGGFAYLGEIAKNTPSAGNIVSYA 120

Query: 121 EIVRERSILRKLVSAADEIATQAFNPQGKQVDKILDEAEQKIFNIGEEGTRMKQGFQSMD 180
           EIVRER+++R+++  A EIA   +NP+G+    +LD AE K+F I E+ T   +G + + 
Sbjct: 121 EIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAESKVFKIAEQRTNANEGPEGIK 180

Query: 181 ALVVELLDRVTEMAENP-NDITGIRTGFHDFDKMTSGLQPGDMIVLAARPSMGKTSLAIN 239
            ++ + +D++ ++  NP N +TG+ +GF D DKMT+G Q GD+I++AARPSMGKT+ A+N
Sbjct: 181 TILEKTVDKIEQLYNNPHNGVTGVSSGFSDLDKMTAGFQSGDLIIVAARPSMGKTTFAMN 240

Query: 240 IAEHVALEEGLPVAVFSMEMGASQLAVRIVGSIGRIDQGHLRTGKLSDEEWPRLTEAIE- 298
           + E  A+ E  PV +FS+EM + Q+ +R++ S+GR+DQ  +RTG+L DE+W R++  +  
Sbjct: 241 LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGI 300

Query: 299 KLRTVSLHIDETPGLSTSELRANARRLARQYGRLGLIVVDYLQLMSTSSSGDENRATAVG 358
            L    ++ID+  GL+ +E+R+ ARR+AR++G L +I+VDYLQLM   +  D NR   + 
Sbjct: 301 MLEQGKMYIDDGSGLTPTEVRSRARRIAREHGGLSMIMVDYLQLMQVPALSD-NRTLEIA 359

Query: 359 EISRGLKMLAKELKCPVIALSQLSRGVESRTDKRPMMSDLRESGAIEQDADIIMFIYRDD 418
           EISR LK LAKEL+ PVIALSQL+R +E R DKRP+ SDLRESG+IEQDAD+IMFIYRD+
Sbjct: 360 EISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDE 419

Query: 419 YYDKNSKEPGVAEVIISKHRNGPTGTVKLAFLKPITKFENLASYSHNE 466
            Y+ +S + G AE+II K RNGP G V+L F    ++F+N A     E
Sbjct: 420 VYNNDSPDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEE 467