Pairwise Alignments

Query, 873 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Variovorax sp. SCN45

Subject, 868 a.a., ATP-dependent protease from Sinorhizobium meliloti 1021

 Score =  912 bits (2358), Expect = 0.0
 Identities = 482/849 (56%), Positives = 630/849 (74%), Gaps = 8/849 (0%)

Query: 4   DKLTTKFQEALGDAQSLALGNDNAYIEPAHLLAAMLRQDDGPRA-LLERAGVNVPGLTQA 62
           +K + + +  L  AQ+ AL   +    P H+L  +L  D G  A L+ERAG N       
Sbjct: 4   EKYSERVRGFLQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAKVG 63

Query: 63  AEAAIKKLPQVQG-HDIVQVGPELGKLLQATEKEAIKRNDQFIAGELFLLALA-DSKADI 120
             AA+ KLP+V G +  V +   L K+  A E  A K  D F+  E  LLALA +S A  
Sbjct: 64  TAAALAKLPKVTGGNGSVYLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAAT 123

Query: 121 GKTAKENGLSRKSLEAAIDAVRGGQGVNSADAEGQREALKKYCMDLTERARLGKLDPVIG 180
                + G++   L   I+ +R G+  +SA+AE   ++LKKY  DLT  AR GKLDPVIG
Sbjct: 124 ASILSKAGVTPTKLNQVINEIRKGRTADSANAEQGFDSLKKYARDLTAEAREGKLDPVIG 183

Query: 181 RDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDM 240
           RD+EIRR IQVL RRTKNNPVLIGEPGVGKTAI EGLA RIV G+VP+SLK KR+++LDM
Sbjct: 184 RDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMALDM 243

Query: 241 AALLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPA 300
            AL+AGAKFRGEFEERLK VLNE+  + G+ I+FIDE+HT+VGAGKA+GAMDA N+LKPA
Sbjct: 244 GALIAGAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLLKPA 303

Query: 301 LARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHG 360
           LARGELHCVGATTLDEYRK++EKDAAL RRFQ ++V EP+VE TI+ILRGL+EKYE HH 
Sbjct: 304 LARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHK 363

Query: 361 VQITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQL 420
           V+I+D A+VAAA LS+RYITDRFLPDKAIDL+DEAA+++++++DSKPE +D LDRR+IQL
Sbjct: 364 VRISDSALVAAAALSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRVIQL 423

Query: 421 QIEREAVRREKDEASQKRLGLIEDEIVKLQKEIADYDEIWQAEKAQAQGSAQVREDVDKI 480
           +IEREA+++E D +S+ RL  +E ++  L++E A     WQAEK +   +A +++ +D+ 
Sbjct: 424 KIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQLDEA 483

Query: 481 KFQIEEWKRKGDFNKVAELQYGQLPALEKRLKEAEASEASKGKSSAPTLLRTQVGSEEIA 540
           + +++  +RKG+F +  EL YG +P LEK L EAE+ +     +SA  +++  V  + IA
Sbjct: 484 RNELQIAQRKGEFQRAGELAYGVIPNLEKELAEAESQDG----ASANPMVQEVVTPDNIA 539

Query: 541 EVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRP 600
            +V+R TGIPV K+++GERDKLL MED+L + VVGQ +A+ AV+ A+RRSR+GL DPNRP
Sbjct: 540 HIVSRWTGIPVDKMLEGERDKLLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRP 599

Query: 601 TGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYE 660
            GSF+FLGPTGVGKTEL KALA FLFD E  L+RIDMSE+MEKHSVARLIGAPPGYVGYE
Sbjct: 600 IGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKHSVARLIGAPPGYVGYE 659

Query: 661 EGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMT 720
           EGG LTE+VRR+PY VVL DE+EKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNT+I+MT
Sbjct: 660 EGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMT 719

Query: 721 SNIGSPIIQAM-VGKPSEEIKEAVWDELKNYFRPEFLNRIDETVVFHALDAKNIESIAAI 779
           SN+G+  + A+   + S+ +++ V + ++  FRPEFLNR+DE ++FH L    + +I  I
Sbjct: 720 SNLGAEYLTALGENEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDI 779

Query: 780 QLKVLQARLAKMDLGLEVSPAALAEIAKVGFDPVFGARPLKRAIQQRIENPLSKLLLDGS 839
           QL+ L+  L+   + LE+   A   +A  G+DP +GARPLKRAIQ+ +++PL++ +L G 
Sbjct: 780 QLERLRKLLSDRKITLELEDDARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGE 839

Query: 840 FGPKDTIEV 848
           F     I+V
Sbjct: 840 FPDGSVIKV 848