Pairwise Alignments

Query, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  116 bits (290), Expect = 7e-31
 Identities = 89/293 (30%), Positives = 133/293 (45%), Gaps = 6/293 (2%)

Query: 1   MRRHIPSTRALLIFDAVARHHGVGKAAEELCLTHSAVSQQLRLLESQIGVRLVQRTARGT 60
           M R +P   A+  F+A ARH    +AAEEL +T +AVS Q++ LE  +G++L +R  R  
Sbjct: 1   MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL 60

Query: 61  ELTEPGRRYHGQISGDLLRLQNHTLEAMAQRTDGLRLLVGAVPVLAEGWLTPRLPEFIAQ 120
            LTE G+ Y   I    ++L + T   +A+   G  L V   P  A  WL PRL +F  +
Sbjct: 61  LLTEEGQSYFLDIKDIFIQLADATDRLLARSAIG-SLTVSMSPSFAIQWLVPRLSKFSEK 119

Query: 121 HPGCSLHLQVFPTHLYMEDLPFDVGVQYDDAVWPGANALPLMGEPCVVVCSPK-AKGRAA 179
           +P   + ++   T         DV + Y    WPG  A  L  E  + VCSP    G   
Sbjct: 120 NPEIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKP 179

Query: 180 MAR-GDFRAAPLLHLRTRMGAWEEWFGHAANARAPENLVAGHRFDLFSSLVAAVRADLGV 238
           +++  D +   LLH  +R   W+ WF          N+  G  F   S ++ A     GV
Sbjct: 180 LSKPEDLKHHTLLHDMSRHD-WQAWFRQCGITDI--NVNQGPIFSHSSLVLQAAAHGQGV 236

Query: 239 GLVPEYFIERELRSGELVLACPERVPSSRGYSVFVAPSRTDDALVGAFVEWLL 291
            L        ++++G LV    E + S   Y +    +  +   V AF EW+L
Sbjct: 237 ALGYSVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWML 289