Pairwise Alignments

Query, 290 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 9e-27
 Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 13/244 (5%)

Query: 45  EHFLSADTLVELHEHPWPQLTFSTRGVIRLSTQDGSYIVPPSRALWVPANMPHSITLIED 104
           E FLS +T    H HPW Q+   + G++ +  +D  ++ PP  A+WVPA + H     + 
Sbjct: 26  EAFLS-NTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKP 84

Query: 105 AELRTVYLHAWIAPTWE-KCEVLEISPLLRALMLALDTTPDGLPPADPHAPQR---ERMI 160
            E  ++ + + +   +  K  +++++ ++ A++       D     + +  Q    +R++
Sbjct: 85  IEYCSLNIASQLTTAFPAKTSLIKVTSIVSAII-------DDFRERNINVAQSCEDKRLV 137

Query: 161 APLLVDEVERATQIRIDVPLPADKRLRQLCEVLLRNPADRATLAERAATIGASERTVARL 220
             LL     R TQ    +P    K L  +   +  NP D  TL + A  +  +ERT+AR 
Sbjct: 138 QVLLDQLATRETQHHF-LPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARH 196

Query: 221 FRDQLGMSWQQWRQQAVMAHALPLLARGMAVSQVAAASGYATDSAFCAMFKAATGRSPTS 280
            + +LGMS+ +WR +    +++ LL +G AV +VA   GY   S F  MFK  +G +P  
Sbjct: 197 CQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQ 256

Query: 281 FQHR 284
           ++ R
Sbjct: 257 YKSR 260